import os
import wx
-#import wx.lib.agw.aui as aui
-import agw.aui as aui
+import wx.lib.hyperlink as hl
+if wx.__version__ >= '2.11' :
+ import wx.lib.agw.aui as aui
+else :
+ import aui
from chemins import ConstructPathOut, ChdTxtPathOut, FFF, ffr, PathOut, StatTxtPathOut, simipath
from ConfigParser import ConfigParser
from functions import ReadProfileAsDico, GetTxtProfile, read_list_file, ReadList, exec_rcode, print_liste, BugReport, DoConf, indices_simi, check_Rresult, progressbar
from Liste import *
from search_tools import SearchFrame
from dialog import PrefGraph, PrefExport, PrefSimpleFile, PrefDendro
-from guifunct import SelectColumn, PrepSimi
-from corpusNG import Corpus
+from guifunct import SelectColumn, PrepSimi, PrefSimi
+from corpus import Corpus
import datetime
import sys
import tempfile
+from time import sleep
import shutil
-#import webbrowser
import codecs
import logging
todel = []
for i in range(0,len(list_graph)):
if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) :
- self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
+ filename, ext = os.path.splitext(list_graph[i][0])
+ if ext == '.svg' :
+ self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0])))
+ else :
+ self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1]))
self.buts.append(wx.Button(self.panel_1, wx.ID_DELETE, name = `i - b`))
else :
oldlab.Destroy()
oldbut = self.buts.pop(image_id)
oldbut.Show(False)
- #No = [but.Destroy() for but in self.buts]
- #self.buts = [wx.Button(self.panel_1, wx.ID_DELETE, name = `i`) for i, img in enumerate(self.listimg)]
for i, but in enumerate(self.buts) :
but.SetName(`i`)
todel = self.list_graph.pop(image_id)
os.remove(os.path.join(self.dirout, todel[0]))
print_liste(self.Dict[self.itempath], self.list_graph)
- #self.sizer_1.Destroy()
- #self.sizer_2.Destroy()
- #self.sizer_3.Destroy()
- #self.__do_layout()
self.sizer_3.Fit(self.panel_1)
self.Layout()
else :
"""
txt += write_afc_graph(self)
filetmp = tempfile.mktemp()
- file = open(filetmp,'w')
- file.write(txt)
- file.close()
+ with open(filetmp, 'w') as f :
+ f.write(txt)
pid = exec_rcode(self.ira.RPath, filetmp)
check_Rresult(self.ira, pid)
if self.param['typegraph'] == 0 :
if self.param['cex_txt'] : txt += u' - taille du texte proportionnel à la masse'
if self.param['tchi'] : txt += u' - taille du texte proportionnel au chi2 d\'association'
#list_graph = read_list_file(self.DictPathOut[self.itempath], self.coding)
- self.list_graph.append([self.fileout, txt])
+ if self.param['svg'] :
+ filename, ext = os.path.splitext(self.fileout)
+ self.fileout = filename + '.svg'
+ self.list_graph.append([os.path.basename(self.fileout), txt])
print_liste(self.DictPathOut[self.itempath], self.list_graph)
- self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY)))
+ if not self.param['svg'] :
+ self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY)))
+ else :
+ self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, self.fileout, URL=self.fileout))
self.sizer_3.Add( self.listimg[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.labels.append(wx.StaticText(self.panel_1,-1, txt))
self.sizer_3.Add(self.labels[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.Dict = dico
self.txt = txt
self.parent = parent
- self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier"))
+ self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.FONTWEIGHT_BOLD, 0, "courier"))
self.labels = []
self.listimg = []
self.dirout = os.path.dirname(self.Dict['ira'])
Profile = DictPathOut['PROFILE_OUT']
AntiProfile = DictPathOut['ANTIPRO_OUT']
+ self.encoding = self.corpus.parametres['syscoding']
if isinstance(self.corpus, Corpus) :
- self.encoding = self.corpus.parametres['syscoding']
self.corpus.make_ucecl_from_R(self.pathout['uce'])
- elif 'tableau' in dir(gparent) :
- self.encoding = gparent.tableau.parametres['syscoding']
+ corpname = self.corpus.parametres['corpus_name']
+ else :
+ corpname = self.corpus.parametres['name']
clnb = parametres['clnb']
dlg = progressbar(self, maxi = 4 + clnb)
self.clnb = clnb
- corpname = self.corpus.parametres['corpus_name']
print 'lecture des profils'
dlg.Update(2, u'lecture des profils')
if isinstance(self.corpus, Corpus) :
panel.corpus = self.corpus
- panel.dictpathout = self.DictPathOut
- panel.pathout = self.DictPathOut
- panel.parent = self.parent
- panel.DictProfile = self.DictProfile
- panel.cluster_size = self.cluster_size
- panel.debtext = self.debtext
+ else :
+ panel.tableau = self.corpus
+ panel.dictpathout = self.DictPathOut
+ panel.pathout = self.DictPathOut
+ panel.parent = self.parent
+ panel.DictProfile = self.DictProfile
+ panel.cluster_size = self.cluster_size
+ panel.debtext = self.debtext
# self.ID_rapport = wx.NewId()
# #rap_img = wx.Image(os.path.join(self.parent.images_path,'icone_rap_16.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
if isinstance(self.corpus, Corpus) :
panel.TabChdSim.corpus = corpus
panel.TabChdSim.corpus.dictpathout = self.DictPathOut
- panel.parametres = self.parametres
- self.panel = panel
+ else :
+ panel.TabChdSim.tableau = corpus
+ panel.TabChdSim.tableau.dictpathout = self.DictPathOut
+ panel.parametres = self.parametres
+ self.panel = panel
self.notenb = self.parent.nb.GetPageCount()
-def PrintRapport(self, corpus, parametres, txt = True):
+def PrintRapport(self, corpus, parametres, istxt = True):
#if sys.platform == 'win32':
# sep = '\r\n'
#else:
""" % datetime.datetime.now().ctime()
- totocc = corpus.gettotocc()
- if txt :
- txt += u'nombre d\'uci: %i%s' % (corpus.getucinb(), sep)
- txt += u'nombre d\'uce: %i%s' % (corpus.getucenb(), sep)
+ if istxt :
+ totocc = corpus.gettotocc()
+ txt += u'nombre de textes: %i%s' % (corpus.getucinb(), sep)
+ txt += u'nombre de segments de textes: %i%s' % (corpus.getucenb(), sep)
txt += u'nombre de formes: %i%s' % (len(corpus.formes), sep)
txt += u'nombre d\'occurrences: %i%s' % (totocc, sep)
txt += u'moyenne d\'occurrences par forme: %f%s' % (float(totocc) / float(len(self.corpus.formes)), sep)
txt += u'nombre de formes actives de fréquence >= %i: %i%s' % (parametres['eff_min_forme'], parametres['nbactives'], sep)
txt += u'moyenne d\'occurrences par uce :%f%s' % (float(totocc) / float(corpus.getucenb()), sep)
if 'tailleuc1' in parametres :
- if parametres['classif_mode'] != 0 :
- txt += u'taille uc1 : %i\n' % parametres['tailleuc1']
- else:
- txt += u'taille uc1 / uc2: %i / %i - %i / %i%s' % (parametres['tailleuc1'], parametres['tailleuc2'], parametres['lenuc1'], parametres['lenuc2'], sep)
- elif not txt :
+ if parametres['classif_mode'] == 0 :
+ txt += u'taille rst1 / rst2: %i / %i - %i / %i%s' % (parametres['tailleuc1'], parametres['tailleuc2'], parametres['lenuc1'], parametres['lenuc2'], sep)
+ else :
self.Ucenb = self.nbind
txt += u'nombre d\'individus : %i%s' % (self.nbind, sep)
txt += u'nombre de classes : %i%s' % (self.clnb, sep)
- if txt :
+ if istxt :
txt += u'nombre de classes : %i%s' % (parametres['clnb'], sep)
if parametres['classif_mode'] == 0 or parametres['classif_mode'] == 1 :
- txt += u'%i uce classées sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucenb(), (float(sum([len(cl) for cl in corpus.lc])) / float(corpus.getucenb())) * 100, sep)
+ txt += u'%i segments classés sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucenb(), (float(sum([len(cl) for cl in corpus.lc])) / float(corpus.getucenb())) * 100, sep)
elif self.parametres['classif_mode'] == 2 :
- txt += u'%i uci classées sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucinb(), (float(sum([len(cl) for cl in corpus.lc]))) / float(corpus.getucinb()) * 100, sep)
- elif analyse == 'quest' :
+ txt += u'%i textes classés sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucinb(), (float(sum([len(cl) for cl in corpus.lc]))) / float(corpus.getucinb()) * 100, sep)
+ else :
txt += u'%i uce classées sur %i (%.2f%%)%s' % (self.ucecla, self.Ucenb, (float(self.ucecla) / float(self.Ucenb)) * 100, sep)
txt += """
###########################
temps d'analyse : %s
###########################
-""" % parametres['time']
+""" % parametres.get('time', '')
with open(self.pathout['pre_rapport'], 'w') as f :
f.write(txt)
self.dirout = os.path.dirname(self.dictpathout['ira'])
self.list_graph = list_graph
self.parent = self.GetParent()#parent
- self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier"))
+ self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "Arial"))
self.labels = []
self.listimg = []
self.tabchd = self.parent.GetParent()
self.ira = self.tabchd.GetParent()
self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL)
+ self.panel_1.SetBackgroundColour('white')
self.deb = wx.StaticText(self.panel_1, -1, txt)
dendro_img = wx.Image(os.path.join(self.ira.images_path,'but_dendro.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
self.butdendro = wx.BitmapButton(self, -1, dendro_img)
text.Wrap( -1 )
self.fgSizer5.Add( text, 0, wx.ALL, 5 )
-class GraphPanelSimi(wx.Panel):
- def __init__(self, parent, dico, list_graph):
- wx.Panel.__init__(self,parent)
- self.afcnb = 1
- self.Dict = dico
- self.dirout = os.path.dirname(self.Dict['ira'])
- self.parent = self.GetParent()#parent
- self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier"))
- self.labels = []
- self.listimg = []
- self.tabsimi = self.parent.GetParent()
- self.ira = self.tabsimi.GetParent()
- self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL)
- afc_img = wx.Image(os.path.join(self.ira.images_path,'button_simi.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
- self.butafc = wx.BitmapButton(self, -1, afc_img)
- export_img = wx.Image(os.path.join(self.ira.images_path,'button_export.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
- self.butexport = wx.BitmapButton(self, -1, export_img)
-
- for i in range(0,len(list_graph)):
- if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) and list_graph[i][0] != '' :
- self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
- self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1]))
-
- self.__set_properties()
- self.__do_layout()
-
- def __set_properties(self):
- self.panel_1.EnableScrolling(True,True)
- #self.panel_1.SetSize((1000,1000))
- self.panel_1.SetScrollRate(20, 20)
-
- def __do_layout(self):
- self.sizer_1 = wx.BoxSizer(wx.HORIZONTAL)
- self.sizer_2 = wx.BoxSizer(wx.VERTICAL)
- self.sizer_3 = wx.BoxSizer(wx.VERTICAL)
- self.sizer_2.Add(self.butafc, 0, 0, 0)
- self.sizer_2.Add(self.butexport, 0, 0, 0)
- for i in range(0, len(self.listimg)):
- self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
- self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
- self.panel_1.SetSizer(self.sizer_3)
- self.sizer_1.Add(self.sizer_2, 0, wx.EXPAND, 0)
- self.sizer_1.Add(self.panel_1, 1, wx.EXPAND, 0)
- self.SetSizer(self.sizer_1)
-
class DefaultTextLayout :
def __init__(self, ira, corpus, parametres) :
self.pathout = PathOut(dirout = parametres['pathout'])
with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f :
self.actives = f.read()
self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()]
- dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)])
+ if os.path.exists(self.pathout['actives_nb.csv']) :
+ with open(self.pathout['actives_nb.csv'], 'r') as f :
+ act_nb = f.read()
+ act_nb = act_nb.splitlines()
+ dictcol = dict([[i, [self.actives[i], int(act_nb[i])]] for i, val in enumerate(self.actives)])
+ else :
+ dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)])
#res = SelectColumn(self.ira, dictcol, self.actives, self.pathout['selected.csv'], selected = selected, dlg = True)
#if res.ok :
prep = PrepSimi(self.ira, self, self.parametres,self.pathout['selected.csv'], self.actives, indices_simi, wordlist = dictcol, selected = selected)
pid = exec_rcode(self.ira.RPath, script.scriptout, wait = True)
check_Rresult(self.ira, pid)
if self.parametres['type_graph'] == 1:
+ if self.parametres['svg'] :
+ filename, ext = os.path.splitext(script.filename)
+ fileout = filename + '.svg'
+ else :
+ fileout = script.filename
if os.path.exists(self.pathout['liste_graph']):
graph_simi = read_list_file(self.pathout['liste_graph'])
- graph_simi.append([os.path.basename(script.filename), script.txtgraph])
+ graph_simi.append([os.path.basename(fileout), script.txtgraph])
else :
- graph_simi = [[os.path.basename(script.filename), script.txtgraph]]
+ graph_simi = [[os.path.basename(fileout), script.txtgraph]]
print_liste(self.pathout['liste_graph'], graph_simi)
DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira'])
if self.parametres['type_graph'] == 1:
- self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(script.filename, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ if self.parametres['svg'] :
+ self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ else :
+ self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.graphpan.sizer_3.Fit(self.graphpan.panel_1)
self.graphpan.Layout()
self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL))
def export(self, evt) :
+ nb = 1
+ while os.path.exists(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')):
+ nb +=1
+ fileout = ffr(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml'))
+ txt = """
+ library(igraph)
+ load("%s")
+ fileout <- "%s"
+ graph <- graph.simi$graph
+ V(graph)$x <- graph.simi$layout[,1]
+ V(graph)$y <- graph.simi$layout[,2]
+ V(graph)$weight <- graph.simi$label.cex
+ V(graph)$colors <- vertex.label.color
+ E(graph)$weigth <- graph.simi$we.width
+ write.graph(graph, fileout, format = 'graphml')
+ """ % (self.pathout['RData.RData'], fileout)
+ filetmp = tempfile.mktemp()
+ with open(filetmp, 'w') as f :
+ f.write(txt)
+ exec_rcode(self.ira.RPath, filetmp)
+ mss = wx.MessageDialog(self.ira, fileout, u'Fichier exporté', wx.OK)
+ mss.CenterOnParent()
+ mss.ShowModal()
+ mss.Destroy()
+
+class DefaultMatLayout :
+ def __init__(self, parent, tableau, parametres) :
+ self.pathout = PathOut(dirout = parametres['pathout'])
+ self.ira = parent
+ self.parent = parent
+ self.tableau = tableau
+ self.parametres = parametres
+ self.dolayout()
+
+ def dolayout(self) :
pass
- # def read_result(self) :
- # #self.corpus.read_corpus_from_shelves(self.corpus.dictpathout['db'])
- # #self.corpus.make_et_table()
- # self.result = {}
- # with open(os.path.join(self.pathout,'glob.txt'), 'r') as f :
- # self.result['glob'] = f.read()
+class SimiMatLayout(DefaultMatLayout) :
+ def dolayout(self):
+ self.pathout.basefiles(simipath)
+ self.indices = indices_simi
+ if os.path.exists(self.pathout['liste_graph']) :
+ list_graph = read_list_file(self.pathout['liste_graph'])
+ else :
+ list_graph = [['','']]
+ notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT
+ self.tabsimi = aui.AuiNotebook(self.parent.nb, -1, wx.DefaultPosition)
+ self.tabsimi.SetAGWWindowStyleFlag(notebook_flags)
+ self.tabsimi.SetArtProvider(aui.ChromeTabArt())
+ self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport)
+ self.tabsimi.AddPage(self.graphpan, 'Graph')
+ self.tabsimi.parametres = self.parametres
+ self.parent.nb.AddPage(self.tabsimi, 'Analyse de graph')
+ self.parent.ShowTab(True)
+ self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1)
+
+ def redosimi(self,evt) :
+ with open(self.pathout['selected.csv'],'r') as f :
+ selected = f.read()
+ selected = [int(val) for val in selected.splitlines()]
+ #if self.actives is None :
+ # with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f :
+ # self.actives = f.read()
+ # self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()]
+ actives = [[val, self.tableau.actives[val][0]] for val in self.tableau.actives]
+ #self.tableau.make_listactives()
+ actives = dict([[i, val] for i, val in enumerate(actives)])
+ #dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)])
+ self.dial = PrefSimi(self.parent, -1, self.parametres, self.indices, wordlist = actives, selected = selected, actives = self.tableau.listactives)
+ self.dial.CenterOnParent()
+ self.val = self.dial.ShowModal()
+ if self.val == wx.ID_OK :
+ last = self.dial.listcol.GetFirstSelected()
+ lastl = [self.dial.listcol.GetFirstSelected()]
+ indexes = [self.dial.listcol.getColumnText(self.dial.listcol.GetFirstSelected(),0)]
+ while self.dial.listcol.GetNextSelected(last) != -1:
+ last = self.dial.listcol.GetNextSelected(last)
+ lastl.append(last)
+ indexes.append(self.dial.listcol.getColumnText(last,0))
+ self.column = [self.tableau.listactives.index(val) for val in indexes]
+ self.column.sort()
+ with open(self.pathout['selected.csv'], 'w') as f :
+ f.write('\n'.join([`val` for val in self.column]))
+ self.make_param()
+ self.dial.Destroy()
+ self.script = PrintSimiScript(self)
+ self.script.make_script()
+ self.tmpfile = self.script.scriptout
+ dlg = progressbar(self, maxi = 2)
+ self.DoR(dlg)
+ dlg.Destroy()
+ if self.parametres['type_graph'] == 1:
+ if self.parametres['svg'] :
+ filename, ext = os.path.splitext(self.script.filename)
+ fileout = filename + '.svg'
+ else :
+ fileout = self.script.filename
+ if os.path.exists(self.pathout['liste_graph']):
+ graph_simi = read_list_file(self.pathout['liste_graph'])
+ graph_simi.append([os.path.basename(fileout), self.script.txtgraph])
+ else :
+ graph_simi = [[os.path.basename(fileout), self.script.txtgraph]]
+ print_liste(self.pathout['liste_graph'], graph_simi)
+ DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira'])
+ if self.parametres['type_graph'] == 1:
+ if self.parametres['svg'] :
+ self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ else :
+ self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(self.script.filename, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, self.script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ self.graphpan.sizer_3.Fit(self.graphpan.panel_1)
+ self.graphpan.Layout()
+ self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL))
+ else :
+ self.dial.Destroy()
+
+
+ def make_param(self) :
+ if self.parametres['first'] :
+ keep_coord = False
+ else :
+ keep_coord = self.dial.check_coord.GetValue()
+ #self.select = self.dial.check_colch.GetValue()
+
+ paramsimi = {'coeff' : self.dial.choice1.GetSelection(),
+ 'layout' : self.dial.choice2.GetSelection(),
+ 'type_graph' : self.dial.choice3.GetSelection(),
+ 'arbremax' : self.dial.check1.GetValue(),
+ 'coeff_tv' : self.dial.check_s_size.GetValue(),
+ 'coeff_tv_nb' : self.dial.spin_tv.GetValue(),
+ 'tvprop' : self.dial.check2.GetValue(),
+ 'tvmin' : self.dial.spin_tvmin.GetValue(),
+ 'tvmax' : self.dial.spin_tvmax.GetValue(),
+ 'coeff_te' : self.dial.check3.GetValue(),
+ 'coeff_temin' : self.dial.spin_temin.GetValue(),
+ 'coeff_temax' : self.dial.spin_temax.GetValue(),
+ 'label_e' : self.dial.check_elab.GetValue(),
+ 'label_v' : self.dial.check_vlab.GetValue(),
+ 'vcex' : self.dial.check_vcex.GetValue(),
+ 'vcexmin' : self.dial.spin_vcexmin.GetValue(),
+ 'vcexmax' : self.dial.spin_vcexmax.GetValue(),
+ 'cex' : self.dial.spin_cex.GetValue(),
+ 'seuil_ok' : self.dial.check_seuil.GetValue(),
+ 'seuil' : self.dial.spin_seuil.GetValue(),
+ 'cols' : self.dial.cols.GetColour(),
+ 'cola' : self.dial.cola.GetColour(),
+ 'width' : self.dial.spin_width.GetValue(),
+ 'height' : self.dial.spin_height.GetValue(),
+ 'first' : False,
+ 'keep_coord' : keep_coord,
+ 'alpha' : self.dial.slider_sphere.GetValue(),
+ 'film' : self.dial.film.GetValue(),
+ 'svg' : self.dial.choix_format.GetSelection(),
+ 'halo' : self.dial.halo.GetValue(),
+ 'com' : self.dial.comcheck.GetValue(),
+ 'communities' : self.dial.choix_com.GetSelection(),
+ }
+ if 'cexfromchi' in self.parametres :
+ paramsimi['cexfromchi'] = self.dial.checkit.GetValue()
+ if 'sfromchi' in self.parametres :
+ paramsimi['sfromchi'] = self.dial.checki.GetValue()
+ if 'vlabcolor' in self.parametres :
+ paramsimi['vlabcolor'] = self.parametres['vlabcolor']
+ if 'check_bystar' in dir(self.dial) :
+ paramsimi['bystar'] = self.dial.check_bystar.GetValue()
+ paramsimi['stars'] = self.parametres['stars']
+ self.parametres.update(paramsimi)
+
+ def DoR(self, dlg):
+ if self.parametres['type_graph'] == 1 :
+ graph = False
+ wait = False
+ else :
+ graph = True
+ wait = True
+ pid = exec_rcode(self.parent.RPath, self.tmpfile, wait = wait, graph = graph)
+ if self.parametres['type_graph'] == 1 :
+ while pid.poll() == None :
+ dlg.Pulse(u'R ...')
+ sleep(0.2)
+ check_Rresult(self.parent, pid)
+
+ def export(self, evt) :
+ nb = 1
+ while os.path.exists(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')):
+ nb +=1
+ fileout = ffr(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml'))
+ txt = """
+ library(igraph)
+ load("%s")
+ fileout <- "%s"
+ graph <- graph.simi$graph
+ V(graph)$x <- graph.simi$layout[,1]
+ V(graph)$y <- graph.simi$layout[,2]
+ V(graph)$weight <- graph.simi$label.cex
+ V(graph)$colors <- vertex.label.color
+ E(graph)$weigth <- graph.simi$we.width
+ write.graph(graph, fileout, format = 'graphml')
+ """ % (self.pathout['RData.RData'], fileout)
+ filetmp = tempfile.mktemp()
+ with open(filetmp, 'w') as f :
+ f.write(txt)
+ exec_rcode(self.ira.RPath, filetmp)
+ mss = wx.MessageDialog(self.ira, fileout, u'Fichier exporté', wx.OK)
+ mss.CenterOnParent()
+ mss.ShowModal()
+ mss.Destroy()
+
+
+class GraphPanelSimi(wx.Panel):
+ def __init__(self,parent, dico, list_graph):
+ wx.Panel.__init__(self,parent)
+ self.afcnb = 1
+ self.Dict = dico
+ self.dirout = os.path.dirname(self.Dict['ira'])
+ self.parent = self.GetParent()#parent
+ self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier"))
+ self.labels = []
+ self.listimg = []
+ self.tabsimi = self.parent.GetParent()
+ self.ira = self.tabsimi.GetParent()
+ self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL)
+ afc_img = wx.Image(os.path.join(self.ira.images_path,'button_simi.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
+ self.butafc = wx.BitmapButton(self, -1, afc_img)
+ export_img = wx.Image(os.path.join(self.ira.images_path,'button_export.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
+ self.butexport = wx.BitmapButton(self, -1, export_img)
+ for i in range(0,len(list_graph)):
+ if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) :
+ filename, ext = os.path.splitext(list_graph[i][0])
+ if ext == '.svg' :
+ self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0])))
+ else :
+ self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
+ self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1]))
+
+ self.__set_properties()
+ self.__do_layout()
+
+ def __set_properties(self):
+ self.panel_1.EnableScrolling(True,True)
+ #self.panel_1.SetSize((1000,1000))
+ self.panel_1.SetScrollRate(20, 20)
+
+ def __do_layout(self):
+ self.sizer_1 = wx.BoxSizer(wx.HORIZONTAL)
+ self.sizer_2 = wx.BoxSizer(wx.VERTICAL)
+ self.sizer_3 = wx.BoxSizer(wx.VERTICAL)
+ self.sizer_2.Add(self.butafc, 0, 0, 0)
+ self.sizer_2.Add(self.butexport, 0, 0, 0)
+ for i in range(0, len(self.listimg)):
+ self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+ self.panel_1.SetSizer(self.sizer_3)
+ self.sizer_1.Add(self.sizer_2, 0, wx.EXPAND, 0)
+ self.sizer_1.Add(self.panel_1, 1, wx.EXPAND, 0)
+ self.SetSizer(self.sizer_1)