from guiparam3d import param3d, simi3d
from PrintRScript import write_afc_graph, print_simi3d, PrintSimiScript
from profile_segment import ProfileSegment
-from functions import ReadList
+from functions import ReadList, launchcommand
from listlex import *
from Liste import *
from search_tools import SearchFrame
-from dialog import PrefGraph, PrefExport, PrefSimpleFile, PrefDendro, SimpleDialog
-from guifunct import SelectColumn, PrepSimi, PrefSimi
+from dialog import PrefGraph, PrefExport, PrefSimpleFile, PrefDendro, SimpleDialog, ImageViewer
+from guifunct import SelectColumn, PrepSimi, PrefSimi, redosimi
from webexport import WebExport
from corpus import Corpus
from sheet import MySheet
import shutil
import codecs
import logging
+import gettext
+from graph_to_json import GraphToJson
+_ = gettext.gettext
log = logging.getLogger('iramuteq.layout')
if ext == '.svg' or ext == '.html':
self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0])))
else :
- self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
+ self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY), name=`i-b`))
+ self.listimg[-1].Bind(wx.EVT_RIGHT_DOWN, self.onrightclick)
if os.path.exists(os.path.join(self.dirout,list_graph[i][0] + '_notplotted.csv')) :
txt = _(u"List of not plotted points : ").decode('utf8') + '%s' % os.path.join(self.dirout,list_graph[i][0] + '_notplotted.csv')
else :
todel.append(i)
b += 1
self.list_graph = [graph for i, graph in enumerate(self.list_graph) if i not in todel]
-
- self.param = { 'typegraph' : 0,
+
+ self.param = { 'typegraph' : 0,
'width' : 800,
'height' : 800,
'what' : 0,
'select_nb' : 50,
'select_chi' : 4,
'nbchic' : 30,
- 'over' : 0,
+ 'over' : 0,
'cex_txt' : 0,
'txt_min' : 5,
'txt_max' : 40,
self.panel_1.SetScrollRate(20, 20)
self.panel_1.SetFocus()
- def __do_layout(self):
+ def __do_layout(self):
self.sizer_1 = wx.BoxSizer(wx.VERTICAL)
self.sizer_2 = wx.BoxSizer(wx.HORIZONTAL)
self.sizer_3 = wx.BoxSizer(wx.VERTICAL)
self.Bind(wx.EVT_BUTTON, self.on_delete_image, self.buts[i])
self.panel_1.SetSizer(self.sizer_3)
self.sizer_2.Add(self.panel_1, 1, wx.EXPAND, 0)
- self.SetSizer(self.sizer_2)
+ self.SetSizer(self.sizer_2)
def on_delete_image(self, event) :
image_id = int(event.GetEventObject().GetName())
oldbut.Show(False)
for i, but in enumerate(self.buts) :
but.SetName(`i`)
+ self.listimg[i].SetName(`i`)
todel = self.list_graph.pop(image_id)
os.remove(os.path.join(self.dirout, todel[0]))
print_liste(self.Dict[self.itempath], self.list_graph)
self.Layout()
else :
dial.Destroy()
-
+
+ def onrightclick(self, event):
+ image_id = int(event.GetEventObject().GetName())
+ image_path = self.list_graph[image_id][0]
+ viewer = ImageViewer(self, {'tmpgraph' : os.path.join(self.dirout,image_path), 'svg': 'FALSE', 'wildcard': '*.*'}, self.labels[image_id].GetLabelText(), self.listimg[image_id].GetSize())
+ viewer.Show()
+ #print image_path
+ #print self.labels[image_id].GetLabelText()
def afc_graph(self,event):
#dirout = os.path.dirname(self.Dict['ira'])
typegraph = 2
if typegraph == 2:
typefile = '.gexf'
+ if typegraph == 3 :
+ typefile = ''
while os.path.exists(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+typefile)):
self.afcnb +=1
self.fileout = ffr(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+typefile))
'select_nb' : dial.spin_nb.GetValue(),
'select_chi' : dial.spin_chi.GetValue(),
'nbchic' : dial.spin_nbchic.GetValue(),
- 'over' : dial.check3.GetValue(),
+ 'over' : dial.check3.GetValue(),
'cex_txt' : dial.check4.GetValue(),
'txt_min' : dial.spin_min.GetValue(),
'txt_max' : dial.spin_max.GetValue(),
afc <- afcf
afc_table <- afcf_table
chistabletot <- specfp
- """
+ """
elif self.itempath == 'liste_graph_afct' :
txt +="""
afc <- afct
f.write(txt)
pid = exec_rcode(self.ira.RPath, filetmp)
check_Rresult(self.ira, pid)
- if self.param['typegraph'] in [0,2] :
+ if self.param['typegraph'] != 1 :
txt = 'Variables '
if self.param['qui'] == 0 : value = u'actives'
if self.param['qui'] == 1 : value = u'supplémentaires'
'bargraphw' : 60*int(self.param['clnb']),
}
web = WebExport(self.ira, parametres)
- self.fileout = web.exportafc()
- self.list_graph.append([os.path.basename(self.fileout), txt])
+ self.fileout = web.exportafc()
+ if self.param['typegraph'] == 3 :
+ fileout = os.path.join(os.path.basename(self.fileout), 'index.html')
+ else :
+ fileout = os.path.basename(self.fileout)
+ self.list_graph.append([fileout, txt])
print_liste(self.DictPathOut[self.itempath], self.list_graph)
if self.param['svg'] or self.param['typegraph'] == 2:
self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, self.fileout, URL=self.fileout))
-
+ elif self.param['typegraph'] == 3 :
+ fileout = os.path.join(self.fileout,'index.html')
+ self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, fileout, URL=fileout))
else :
- self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY)))
+ self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY), name=`len(self.list_graph) - 1`))
+ self.listimg[-1].Bind(wx.EVT_RIGHT_DOWN, self.onrightclick)
self.sizer_3.Add( self.listimg[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.labels.append(wx.StaticText(self.panel_1,-1, txt))
self.sizer_3.Add(self.labels[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.sizer_3.Add(self.buts[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.sizer_3.Fit(self.panel_1)
self.Layout()
-
+
self.panel_1.Scroll(0,self.panel_1.GetScrollRange(wx.VERTICAL))
# elif self.param['typegraph'] == 2 :
# parametres = {'gexffile' : self.fileout,
# }
# web = WebExport(self.ira, parametres)
# afcout = web.exportafc()
-# dial = SimpleDialog(self.ira)
+# dial = SimpleDialog(self.ira)
# dial.link.SetLabel(afcout)
# dial.link.SetURL(afcout)
# dial.Layout()
# dial.ShowModal()
-
+
class GraphPanel(wx.ScrolledWindow):
def __init__(self, parent, dico, list_graph, txt = '', style = wx.TAB_TRAVERSAL):
else :
self.listimg.append(wx.StaticBitmap(self, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
self.labels.append(wx.StaticText(self, -1, list_graph[i][1]))
- self.Bind(wx.EVT_MOTION, self.onMouseMove)
+ self.Bind(wx.EVT_MOTION, self.onMouseMove)
self.__set_properties()
self.__do_layout()
def __set_properties(self):
self.EnableScrolling(True,True)
- self.SetScrollRate(20, 20)
+ self.SetScrollRate(20, 20)
self.SetFocus()
self.sizer_1 = wx.BoxSizer(wx.VERTICAL)
self.sizer_2 = wx.BoxSizer(wx.VERTICAL)
self.sizer_3 = wx.BoxSizer(wx.HORIZONTAL)
- self.sizer_1.Add(self.deb)
+ self.sizer_1.Add(self.deb)
for i in range(0, len(self.listimg)):
self.sizer_1.Add(self.listimg[i], 1, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.sizer_1.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
def onMouseMove(self, event):
self.SetFocus()
-
-def open_antiprofil(panel, AntiProfile, encoding) :
- DictAnti = ReadProfileAsDico(AntiProfile, True, encoding)
+
+def open_antiprofil(panel, AntiProfile, encoding, title = _(u"Antiprofiles").decode('utf8'), translation = False, lems=None) :
+ if not translation :
+ DictAnti = ReadProfileAsDico(AntiProfile, True, encoding)
+ else :
+ DictAnti = AntiProfile
panel.AntiProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition)
for i in range(0, panel.parametres['clnb']):
- tabantiprofile = ProfListctrlPanel(panel, panel, DictAnti[str(i + 1)], True, i + 1)
+ tabantiprofile = ProfListctrlPanel(panel.parent, panel, DictAnti[str(i + 1)], True, i + 1, translation = translation)
+ tabantiprofile.lems = lems
panel.AntiProfNB.AddPage(tabantiprofile, 'classe %s' % str(i + 1))
- panel.TabChdSim.AddPage(panel.AntiProfNB, _(u"Antiprofiles").decode('utf8'))
-
-
+ panel.TabChdSim.AddPage(panel.AntiProfNB, title)
def getlemgram(corpus, lem) :
if not lem[6] in corpus.lems :
class OpenCHDS():
def __init__(self, parent, corpus, parametres, Alceste=False):
- #sep = u'\n '
+ #sep = u'\n '
sep=' '
self.parent = parent
self.corpus = corpus
self.parametres = parametres
self.pathout = PathOut(parametres['ira'])
self.pathout.basefiles(ChdTxtPathOut)
- DictPathOut = self.pathout
+ DictPathOut = self.pathout
self.DictPathOut = DictPathOut
self.dictpathout = DictPathOut
- self.parent = parent
+ self.Alceste = Alceste
Profile = DictPathOut['PROFILE_OUT']
AntiProfile = DictPathOut['ANTIPRO_OUT']
self.corpus.read_tableau(self.pathout['analyse.db'])
clnb = parametres['clnb']
- dlg = progressbar(self, maxi = 4 + clnb)
- self.clnb = clnb
+ dlg = progressbar(self, maxi = 4 + clnb)
+ self.clnb = clnb
print 'lecture des profils'
dlg.Update(2, _(u"Reading profiles").decode('utf8'))
-
+
DictProfile = ReadProfileAsDico(Profile, Alceste, self.encoding)
self.DictProfile = DictProfile
self.cluster_size = []
# #panel.chd_toolbar.AddLabelTool(self.ID_rapport, "rapport", rap_img, shortHelp=u"Produire le rapport", longHelp=u"Exporter un rapport en texte simple")
# butrap = wx.Button(panel.chd_toolbar, self.ID_rapport, u"Rapport ")
# panel.chd_toolbar.AddControl(butrap)
-#
+#
# panel.chd_toolbar.Realize()
# sizer1.Add(panel.chd_toolbar,0, wx.EXPAND, 5)
sizer1.Add(panel.TabChdSim,10, wx.EXPAND, 5)
panel.SetSizer(sizer1)
sizer1.Fit(panel)
-
+
if isinstance(self.corpus, Corpus) :
panel.TabChdSim.corpus = corpus
self.notenb = self.parent.nb.GetPageCount()
-
+
if os.path.exists(self.DictPathOut['liste_graph_chd']) :
list_graph = read_list_file(self.DictPathOut['liste_graph_chd'], self.encoding)
CHD = GraphPanelDendro(panel.TabChdSim, DictPathOut, list_graph, txt = self.debtext)
panel.TabChdSim.AddPage(CHD,'CHD')
-
- panel.ProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition)
- notebook_flags |= aui.AUI_NB_WINDOWLIST_BUTTON
- panel.ProfNB.SetAGWWindowStyleFlag(notebook_flags)
+
+
#panel.ProfNB.SetArtProvider(aui.ChromeTabArt())
#panel.ProfNB = LB.LabelBook(panel, -1, agwStyle = INB_LEFT|INB_SHOW_ONLY_TEXT|INB_FIT_LABELTEXT)
#panel.ProfNB = wx.Listbook(self.parent, -1, style = wx.BK_DEFAULT)
if os.path.exists(DictPathOut['prof_seg']) :
prof_seg = ReadProfileAsDico(DictPathOut['prof_seg'], False, self.encoding)
self.prof_seg_nb = aui.AuiNotebook(panel, -1, wx.DefaultPosition)
+
+
+ panel.ProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition)
+ notebook_flags |= aui.AUI_NB_WINDOWLIST_BUTTON
+ panel.ProfNB.SetAGWWindowStyleFlag(notebook_flags)
for i in range(0, clnb):
self.cluster_size.append(DictProfile[str(i + 1)][0][0:3])
if isinstance(self.corpus, Corpus) :
if clnb > 2 :
self.TabAFC = aui.AuiNotebook(panel.TabChdSim, -1, wx.DefaultPosition)
- log.info('read AFC')
+ log.info('read AFC')
list_graph=read_list_file(DictPathOut['liste_graph_afc'], self.encoding)
self.tabAFCGraph = GraphPanelAfc(self.TabAFC, DictPathOut, list_graph, self.clnb, coding=self.encoding)
self.TabAFC.AddPage(self.tabAFCGraph, _(u"CA").decode('utf8'))
-
+
if os.path.exists(self.DictPathOut['afc_facteur']) :
dictrow, first = ReadList(self.DictPathOut['afc_facteur'], self.encoding)
self.TabAFC_facteur = ListForSpec(self.parent, parametres, dictrow, first[1:])
self.TabAFC.AddPage(self.TabAFC_facteur, _(u"Factor").decode('utf8'))
#self.TabAFC.AddPage(self.TabAFC_colonne, u'Colonnes')
#self.TabAFC.AddPage(self.TabAFC_ligne, u'Lignes')
-
+
sizer_3 = wx.BoxSizer(wx.VERTICAL)
self.parent.nb_panel_2 = wx.Panel(panel.TabChdSim, -1)
self.parent.button_simi = wx.Button(self.parent.nb_panel_2, -1, "Voyager")
self.parent.nb_panel_2.SetSizer(sizer_3)
self.TabAFC.AddPage(self.parent.nb_panel_2, _(u"3D graph").decode('utf8'))
self.parent.Bind(wx.EVT_BUTTON, self.onsimi, self.parent.button_simi)
-
+
panel.TabChdSim.AddPage(panel.ProfNB, _(u"Profiles").decode('utf8'))
#panel.TabChdSim.AddPage(panel.AntiProfNB, 'Antiprofils')
dlg.Update(4 + self.clnb, 'Affichage...')
panel.TabChdSim.AddPage(self.TabAFC, _(u"CA").decode('utf8'))
if os.path.exists(DictPathOut['prof_seg']) :
panel.TabChdSim.AddPage(self.prof_seg_nb, _(u"Repeated segments profiles").decode('utf8'))
-
+
# panel.Bind(wx.EVT_BUTTON, self.ongetrapport, id = self.ID_rapport)
if os.path.exists(os.path.join(self.parametres['pathout'], 'tgenchi2.csv')) :
self.parametres['tgenspec'] = os.path.join(self.parametres['pathout'], 'tgenchi2.csv')
TgenLayout(panel)
+
+ if os.path.exists(self.dictpathout['translations.txt']) :
+ with codecs.open(self.dictpathout['translations.txt'], 'r', 'utf8') as f:
+ translist = f.read()
+ translist = [line.split('\t') for line in translist.splitlines()]
+ for line in translist :
+ self.opentrans(line)
+
panel.TabChdSim.SetSelection(0)
self.parent.nb.AddPage(panel, _(u"Clustering").decode('utf8') + ' - %s' % corpname)
self.parent.ShowTab(True)
- self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1)
+ self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1)
#for pane in self.parent._mgr.GetAllPanes() :
# if isinstance(pane.window, aui.AuiNotebook):
# nb = pane.window
# nb.SetAGWWindowStyleFlag(notebook_flags)
# nb.SetArtProvider(aui.ChromeTabArt())
- dlg.Destroy()
+ dlg.Destroy()
+
+
self.parent._mgr.Update()
-
+
+ def opentrans(self, trans) :
+ prof = ReadProfileAsDico(self.dictpathout[trans[0]], False, 'utf8')
+ with codecs.open(self.dictpathout[trans[1]], 'r', 'utf8') as f :
+ lems = f.read()
+ lems = [line.split('\t') for line in lems.splitlines()]
+ lems = dict(lems)
+ open_antiprofil(self.panel, prof, 'utf8', title = trans[0], translation=True, lems=lems)
+ self.panel.lems = lems
+ self.panel.TabChdSim.SetSelection(self.panel.TabChdSim.GetPageCount() - 1)
+
def onsimi(self,event):
outfile = print_simi3d(self)
error = exec_rcode(self.parent.RPath, outfile, wait = True)
dial.Destroy()
self.corpus.get_stat_by_cluster(fileout)
msg = u"Fini !"
- dlg = wx.MessageDialog(self.parent, msg, _(u"Stat by cluster").decode('utf8'), wx.OK | wx.NO_DEFAULT | wx.ICON_INFORMATION)
+ dlg = wx.MessageDialog(self.parent, msg, _(u"Stat by cluster").decode('utf8'), wx.OK | wx.ICON_INFORMATION)
dlg.CenterOnParent()
if dlg.ShowModal() == wx.ID_OK :
dlg.Destroy()
txt += ' '.join([u'%i' % sum([len(cl) for cl in corpus.lc]), _(u'texts classified on').decode('utf8'), '%i (%.2f%%)%s' % (corpus.getucinb(), (float(sum([len(cl) for cl in corpus.lc]))) / float(corpus.getucinb()) * 100, sep)])
else :
txt += ' '.join(['%i' % self.ucecla, _(u'line classified on').decode('utf8'), '%i (%.2f%%)%s' % (self.Ucenb, (float(self.ucecla) / float(self.Ucenb)) * 100, sep)])
-
+
txt += ''.join([sep, u'###########################', sep, _(u'time').decode('utf8'), ' : %s' % parametres.get('time', ''), sep, u'###########################', sep])
with open(self.pathout['pre_rapport'], 'w') as f :
#self.gparent=gparent
#self.dlist=dlist
#self.first = first
- #self.menu = menu
+ #self.menu = menu
# A window to the left of the client window
#self.listlex = listlex
self.leftwin1 = wx.SashLayoutWindow(
- self, -1, wx.DefaultPosition, (200, 300),
+ self, -1, wx.DefaultPosition, (200, 300),
wx.NO_BORDER|wx.SW_3D
)
self.leftwin1.SetBackgroundColour(wx.Colour(0, 255, 0))
self.leftwin1.SetSashVisible(wx.SASH_RIGHT, True)
self.leftwin1.SetExtraBorderSize(10)
-
+
#textWindow = wx.TextCtrl(
- # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize,
+ # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize,
# wx.TE_MULTILINE|wx.SUNKEN_BORDER
# )
self.leftWindow1 = self.leftwin1
winids.append(self.leftwin1.GetId())
-
+
rightwin1 = wx.SashLayoutWindow(
- self, -1, wx.DefaultPosition, (200, 300),
+ self, -1, wx.DefaultPosition, (200, 300),
wx.NO_BORDER|wx.SW_3D
)
rightwin1.SetSashVisible(wx.SASH_RIGHT, True)
rightwin1.SetExtraBorderSize(10)
#textWindow = wx.TextCtrl(
- # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize,
+ # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize,
# wx.TE_MULTILINE|wx.SUNKEN_BORDER
# )
self.page.tgens, etoiles = ReadList(parametres['tgenspec'], ira.syscoding, sep="\t")
tgen = TGen(path = tgenpath, encoding = parametres['encoding'])
tgen.read()
+ tgenlempath = os.path.join(parametres['pathout'], 'tgenlemchi2.csv')
+ if os.path.exists(tgenlempath) :
+ self.page.parametres['tgenlemspec'] = tgenlempath
+ self.page.tgenlem, etoiles = ReadList(self.page.parametres['tgenlemspec'], ira.syscoding, sep="\t")
tgentab = False
gparent = None
if 'TabChdSim' in dir(page) :
if tab.tgen :
tgentab = tab
break
-
+
if tgentab :
self.page.tgentab.RefreshData(self.page.tgens)
self.page.tgentab.tgens = tgen.tgen
+ self.page.tgentab.tgenlem = self.page.tgenlem
page.SetSelection(i)
else :
self.page.tgentab = ListForSpec(ira, gparent, self.page.tgens, etoiles[1:])
self.page.tgentab.tgen = True
self.page.tgentab.tgens = tgen.tgen
+ if os.path.exists(tgenlempath) :
+ self.page.tgentab.tgenlem = self.page.tgenlem
page.AddPage(self.page.tgentab, _(u'Tgens Specificities').decode('utf8'))
page.SetSelection(page.GetPageCount() - 1)
self.DictType, firstt = ReadList(self.dictpathout['tablespect'], self.corpus.parametres['syscoding'])
self.DictEff, firsteff = ReadList(self.dictpathout['tableafcm'], self.corpus.parametres['syscoding'])
self.DictEffType, firstefft = ReadList(self.dictpathout['tabletypem'], self.corpus.parametres['syscoding'])
- self.DictEffRelForme, firsteffrelf = ReadList(self.dictpathout['eff_relatif_forme'], self.corpus.parametres['syscoding'])
- self.DictEffRelType, firsteffrelt = ReadList(self.dictpathout['eff_relatif_type'], self.corpus.parametres['syscoding'])
+ self.DictEffRelForme, firsteffrelf = ReadList(self.dictpathout['eff_relatif_forme'], self.corpus.parametres['syscoding'])
+ self.DictEffRelType, firsteffrelt = ReadList(self.dictpathout['eff_relatif_type'], self.corpus.parametres['syscoding'])
self.etoiles = firsteff[1:]
#sash = SashList(ira.nb)
-
-
+
+
self.TabStat = aui.AuiNotebook(ira.nb, -1, wx.DefaultPosition)
self.TabStat.parametres = parametres
self.ListPan = ListForSpec(ira, self, self.DictSpec, self.etoiles)
self.ListPanEffType = ListForSpec(ira, self, self.DictEffType, self.etoiles)
self.ListPanEffRelForme = ListForSpec(ira, self, self.DictEffRelForme, self.etoiles)
self.ListPanEffRelType = ListForSpec(ira, self, self.DictEffRelType, self.etoiles)
-
- self.TabStat.AddPage(self.ListPan, _(u'Forms').decode('utf8'))
+
+ self.TabStat.AddPage(self.ListPan, _(u'Forms').decode('utf8'))
if os.path.exists(self.pathout['banalites.csv']) :
self.TabStat.AddPage(self.listban, _(u'Banal forms').decode('utf8'))
self.TabStat.AddPage(self.ListPant, _(u'POS').decode('utf8'))
self.tabAFCTGraph = GraphPanelAfc(self.TabAFC, self.dictpathout, list_graph, self.parametres['clnb'], itempath ='liste_graph_afct', coding=self.encoding)
self.TabAFC.AddPage(self.tabAFCTGraph, _(u'CA POS').decode('utf8'))
self.TabStat.AddPage(self.TabAFC, _(u'CA').decode('utf8'))
-
+
ira.nb.AddPage(self.TabStat, ' - '.join([_(u'Specificities').decode('utf8'), self.parametres['name']]))
self.ira = ira
-
+
self.TabStat.corpus = self.corpus
self.TabStat.etoiles = self.etoiles
+ self.TabStat.pathout = self.pathout
if os.path.exists(os.path.join(self.parametres['pathout'], 'tgenspec.csv')) :
self.parametres['tgenspec'] = os.path.join(self.parametres['pathout'], 'tgenspec.csv')
TgenLayout(self.TabStat)
self.corpus = corpus
self.ira = ira
self.read_result()
+ self.parametres = parametres
self.TabStat = aui.AuiNotebook(ira.nb, -1, wx.DefaultPosition)
self.TabStat.parametres = parametres
self.TabStat.corpus = corpus
list_graph = [['zipf.png', 'zipf']]
self.TabStatTot = GraphPanel(ira.nb, self.pathout, list_graph, self.result['glob'])
self.TabStat.AddPage(self.TabStatTot, _(u'Abstract').decode('utf8'))
-
+
dictlabel = {'total' : _(u'Total').decode('utf8'),
u'formes_actives' : _(u'Actives forms').decode('utf8'),
u'formes_supplémentaires': _(u'Supplementary forms').decode('utf8'),
u'hapax' : _(u'Hapax').decode('utf8'),
}
-
+
for item in self.result:
if item != 'glob':
datam = [['forme', 'nb']]
self.ListPan = ListPanel(ira, self, self.result[item])
- self.TabStat.AddPage(self.ListPan, dictlabel[item])
+ self.TabStat.AddPage(self.ListPan, dictlabel[item])
ira.nb.AddPage(self.TabStat, '%s' % parametres['name'])
ira.nb.SetSelection(ira.nb.GetPageCount() - 1)
ira.ShowAPane("Tab_content")
lcle = {'total' :u'total.csv', u'formes_actives':u'formes_actives.csv', u'formes_supplémentaires':u'formes_supplémentaires.csv', u'hapax': u'hapax.csv'}
self.result = {}
for key in lcle :
- with open(self.pathout[lcle[key]], 'r') as f :
+ with codecs.open(self.pathout[lcle[key]], 'r', sys.getdefaultencoding()) as f :
self.result[key] = [line.split(';') for line in f.read().splitlines()]
self.result[key] = dict([[i,[line[0],int(line[1]), line[2]]] for i, line in enumerate(self.result[key])])
with open(self.pathout['glob.txt'], 'r') as f :
self.butdendro = wx.BitmapButton(self, -1, dendro_img)
self.butdendrotexte = wx.BitmapButton(self, -1, dendro_liste_img)
self.butdendrocloud = wx.BitmapButton(self, -1, dendro_cloud_img)
-
+
for i in range(0,len(list_graph)):
if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) :
filename, ext = os.path.splitext(list_graph[i][0])
else :
self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1]))
-
+
self.__set_properties()
self.__do_layout()
}
self.type_dendro = [ u"phylogram", u"cladogram", u"fan", u"unrooted", u"radial" ]
- def __do_layout(self):
+ def __do_layout(self):
self.sizer_1 = wx.BoxSizer(wx.VERTICAL)
self.sizer_2 = wx.BoxSizer(wx.HORIZONTAL)
self.sizer_3 = wx.BoxSizer(wx.VERTICAL)
self.panel_1.SetSizer(self.sizer_3)
self.sizer_2.Add(self.sizer_1, 0, wx.EXPAND, 0)
self.sizer_2.Add(self.panel_1, 1, wx.EXPAND, 0)
- self.SetSizer(self.sizer_2)
+ self.SetSizer(self.sizer_2)
def make_param(self, dial):
self.param['width'] = dial.m_spinCtrl2.GetValue()
self.param['height'] = dial.m_spinCtrl1.GetValue()
self.param['type_dendro'] = dial.m_choice1.GetSelection()
- self.param['color_nb'] = dial.m_radioBox1.GetSelection()
- self.param['taille_classe'] = dial.m_checkBox1.GetValue()
- self.param['type_tclasse'] = dial.m_radioBox2.GetSelection()
self.param['svg'] = dial.choice_format.GetSelection()
+ if self.param['typedendro'] == 'classique' :
+ self.param['color_nb'] = dial.m_radioBox1.GetSelection()
+ self.param['taille_classe'] = dial.m_checkBox1.GetValue()
+ self.param['type_tclasse'] = dial.m_radioBox2.GetSelection()
+ if self.param.get('translation', False) :
+ if dial.trans.GetSelection() == 0 :
+ del self.param['translation']
+ else :
+ self.param['translation'] = self.param['translation'][dial.trans.GetSelection()-1][1]
def make_dendro(self, dendro = 'simple') :
if self.param['svg'] :
""" % (ffr(dendro_path), ffr(self.ira.RscriptsPath['Rgraph']), ffr(classe_path))
if dendro == 'simple' :
txt += """
- open_file_graph("%s", width=%i, height=%i)
+ open_file_graph("%s", width=%i, height=%i, svg=%s)
plot.dendropr(tree.cut1$tree.cl, classes, type.dendro="%s", histo=%s, bw=%s, lab=NULL, tclasse=%s)
- """ % (ffr(fileout), width, height, type_dendro, histo, bw, tclasse)
+ """ % (ffr(fileout), width, height, svg, type_dendro, histo, bw, tclasse)
elif dendro == 'texte' :
txt += """
load("%s")
debsup <- debet
}
chistable <- chistabletot[1:(debsup-1),]
+ """ % (ffr(self.dictpathout['RData.RData']), ffr(self.ira.RscriptsPath['Rgraph']))
+ if self.param.get('translation', False) :
+ txt += """
+ rn <- read.csv2("%s", header=FALSE, sep='\t')
+ rnchis <- row.names(chistable)
+ commun <- intersect(rnchis, unique(rn[,2]))
+ idrnchis <- sapply(commun, function(x) {which(rnchis==x)})
+ idrn <- sapply(commun, function(x) {which(as.vector(rn[,2])==x)[1]})
+ rownames(chistable)[idrnchis] <- as.vector(rn[idrn,1])
+ """ % ffr(self.param['translation'])
+ txt += """
open_file_graph("%s", width=%i, height=%i, svg = %s)
plot.dendro.prof(tree.cut1$tree.cl, classes, chistable, nbbycl = 60, type.dendro="%s", bw=%s, lab=NULL)
- """ % (ffr(self.dictpathout['RData.RData']), ffr(self.ira.RscriptsPath['Rgraph']), ffr(fileout), width, height, svg, type_dendro, bw)
+ """ % (ffr(fileout), width, height, svg, type_dendro, bw)
elif dendro == 'cloud' :
txt += """
load("%s")
f.write(txt)
busy = wx.BusyInfo(_("Please wait...").decode('utf8'), self.parent)
wx.SafeYield()
- error = exec_rcode(self.ira.RPath, tmpfile, wait=True)
+ error = exec_rcode(self.ira.RPath, tmpfile, wait=True)
del busy
check_Rresult(self.ira, error)
self.list_graph.append([fileout, 'Dendrogramme CHD1 - %s' % type_dendro])
def ondendro(self, evt):
+ self.param['typedendro'] = 'classique'
dial = PrefDendro(self.ira, self.param)
val = dial.ShowModal()
if val == wx.ID_OK :
self.make_param(dial)
self.make_dendro()
-
+
def ondendrotexte(self, evt):
+ self.param['typedendro'] = 'texte'
+ if os.path.exists(self.dictpathout['translations.txt']) :
+ with codecs.open(self.dictpathout['translations.txt'], 'r', 'utf8') as f :
+ content = f.read()
+ print content
+ trans = [line.split('\t')[1] for line in content.splitlines()]
+ trans = [[val, self.dictpathout[val]] for val in trans]
+ self.param['translation'] = trans
dial = PrefDendro(self.ira, self.param)
val = dial.ShowModal()
if val == wx.ID_OK :
self.make_dendro(dendro = 'texte')
def ondendrocloud(self, evt):
+ self.param['typedendro'] = 'cloud'
dial = PrefDendro(self.ira, self.param)
val = dial.ShowModal()
if val == wx.ID_OK :
self.parametres = parametres
fgSizer5 = wx.FlexGridSizer( 0, 2, 0, 0 )
fgSizer5.SetFlexibleDirection( wx.BOTH )
- fgSizer5.SetNonFlexibleGrowMode( wx.FLEX_GROWMODE_SPECIFIED )
+ fgSizer5.SetNonFlexibleGrowMode( wx.FLEX_GROWMODE_SPECIFIED )
self.fgSizer5 = fgSizer5
-
+
self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, _(u"Description of corpus").decode('utf8'), wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText18.Wrap( -1 )
fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 )
-
+
self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText19.Wrap( -1 )
fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 )
self.m_staticText20 = wx.StaticText( self, wx.ID_ANY, u"Nom", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText20.Wrap( -1 )
fgSizer5.Add( self.m_staticText20, 0, wx.ALL, 5 )
-
+
self.m_staticText21 = wx.StaticText( self, wx.ID_ANY, parametres['corpus_name'], wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText21.Wrap( -1 )
fgSizer5.Add( self.m_staticText21, 0, wx.ALL, 5 )
self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, u"Paramètres", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText18.Wrap( -1 )
fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 )
-
+
self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText19.Wrap( -1 )
fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 )
self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, u"Statistiques", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText18.Wrap( -1 )
fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 )
-
+
self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 )
self.m_staticText19.Wrap( -1 )
fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 )
self.fgSizer5.Add( text, 0, wx.ALL, 5 )
class DefaultTextLayout :
- def __init__(self, ira, corpus, parametres) :
+ def __init__(self, ira, corpus, parametres, cmd = False) :
self.pathout = PathOut(dirout = parametres['pathout'])
self.ira = ira
self.parent = ira
self.parametres = parametres
self.corpus = corpus
+ self.cmd = cmd
self.dolayout()
-
- def dolayout(self) :
+
+ def dolayout(self, cmd) :
log.info('no layout yet')
class WordCloudLayout(DefaultTextLayout):
self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1)
self.ira.ShowAPane("Tab_content")
+class LabbeLayout(DefaultTextLayout):
+ def dolayout(self):
+ self.Tab = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition)
+ #if self.parametres['svg'] :
+ # list_graph = [['nuage_1.svg', 'Nuage']]
+ #else :
+ # list_graph = [['nuage_1.png', 'Nuage']]
+ list_graph = [['labbe-tree.png', _(u'Ward clustering (method ward2)').decode('utf8')],
+ ['labbe-heatmap.png', _(u'Heatmap').decode('utf8')],
+ ['labbe-matrix.png', _(u'Matrix').decode('utf8')]]
+ for val in list_graph :
+ #self.TabStatTot = GraphPanel(self.ira.nb, self.pathout, [val])
+ self.Tab.AddPage(GraphPanel(self.Tab, self.pathout, [val]), val[1])
+ self.Tab.corpus = self.corpus
+ self.Tab.parametres = self.parametres
+ self.ira.nb.AddPage(self.Tab, u'%s' % self.parametres['name'])
+ self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1)
+ self.ira.ShowAPane("Tab_content")
+
+def blender(self):
+ nodesfile = self.pathout['nodes.csv']
+ edgesfile = self.pathout['edges.csv']
+ jsonout = self.pathout.makenew('graphe_json', 'json')
+ txt = """
+ library(igraph)
+ load("%s")
+ source("%s")
+ """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['Rgraph']))
+ txt += """
+ nodesf <- "%s"
+ edgesf <- "%s"
+ """ % (ffr(nodesfile), ffr(edgesfile))
+ txt += """
+ if ("communities" %in% names(graph.simi)) {
+ community = TRUE
+ } else {
+ community = FALSE
+ }
+ graph.to.file(graph.simi, nodesfile = nodesf, edgesfile = edgesf, community = community)
+ """
+ filetmp = tempfile.mktemp()
+ with open(filetmp, 'w') as f :
+ f.write(txt)
+ exec_rcode(self.ira.RPath, filetmp)
+ GraphToJson(nodesfile, edgesfile, jsonout)
+ launchcommand(['/home/pierre/prog/blender-2.73-linux-glibc211-x86_64/blender', '-P', os.path.join(self.ira.AppliPath, 'network_to_blender.py'), jsonout])
+
+
class SimiLayout(DefaultTextLayout) :
def dolayout(self) :
self.pathout.basefiles(simipath)
self.indices = indices_simi
if os.path.exists(self.pathout['liste_graph']) :
list_graph = read_list_file(self.pathout['liste_graph'])
- else :
+ else :
list_graph = [['','']]
- notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT
- self.tabsimi = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition)
- self.tabsimi.SetAGWWindowStyleFlag(notebook_flags)
- self.tabsimi.SetArtProvider(aui.ChromeTabArt())
- self.tabsimi.corpus = self.corpus
- self.tabsimi.parametres = self.parametres
- self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph)
- self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc)
- self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport)
- self.tabsimi.AddPage(self.graphpan, 'Graph')
- self.ira.nb.AddPage(self.tabsimi, _(u'Graph analysis').decode('utf8'))
- self.ira.ShowTab(True)
- self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1)
-
+ if not self.cmd :
+ notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT
+ self.tabsimi = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition)
+ self.tabsimi.SetAGWWindowStyleFlag(notebook_flags)
+ self.tabsimi.SetArtProvider(aui.ChromeTabArt())
+ self.tabsimi.corpus = self.corpus
+ self.tabsimi.parametres = self.parametres
+ self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.blender, self.graphpan.butblender)
+ self.tabsimi.AddPage(self.graphpan, 'Graph')
+ self.ira.nb.AddPage(self.tabsimi, _(u'Graph analysis').decode('utf8'))
+ self.ira.ShowTab(True)
+ self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1)
+
def redosimi(self, evt) :
- with open(self.pathout['selected.csv'],'r') as f :
- selected = f.read()
- selected = [int(val) for val in selected.splitlines()]
- if self.actives is None :
- with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f :
- self.actives = f.read()
- self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()]
- if os.path.exists(self.pathout['actives_nb.csv']) :
- with open(self.pathout['actives_nb.csv'], 'r') as f :
- act_nb = f.read()
- act_nb = act_nb.splitlines()
- dictcol = dict([[i, [self.actives[i], int(act_nb[i])]] for i, val in enumerate(self.actives)])
- else :
- dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)])
- #res = SelectColumn(self.ira, dictcol, self.actives, self.pathout['selected.csv'], selected = selected, dlg = True)
- #if res.ok :
- prep = PrepSimi(self.ira, self, self.parametres,self.pathout['selected.csv'], self.actives, indices_simi, wordlist = dictcol, selected = selected)
- if prep.val == wx.ID_OK :
- self.parametres = prep.parametres
-
- script = PrintSimiScript(self)
- script.make_script()
- pid = exec_rcode(self.ira.RPath, script.scriptout, wait = True)
- check_Rresult(self.ira, pid)
- if self.parametres['type_graph'] in [1,3] :
- if self.parametres['svg'] :
- filename, ext = os.path.splitext(script.filename)
- fileout = filename + '.svg'
- elif self.parametres['type_graph'] == 3 :
- fileout = script.filename
- parametres = {'gexffile' : fileout,
- 'dirout' : os.path.dirname(fileout),
- 'titre': 'Le titre',
- #'nodemin': self.param['txt_min'],
- #'nodemax': self.param['txt_max'],
- #'bargraphw' : 60*int(self.param['clnb']),
- }
- web = WebExport(self.ira, parametres)
- fileout = web.exportsimi()
- else :
- fileout = script.filename
- if os.path.exists(self.pathout['liste_graph']):
- graph_simi = read_list_file(self.pathout['liste_graph'])
- graph_simi.append([os.path.basename(fileout), script.txtgraph])
- else :
- graph_simi = [[os.path.basename(fileout), script.txtgraph]]
- print_liste(self.pathout['liste_graph'], graph_simi)
- DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira'])
- if self.parametres['type_graph'] in [1,3] :
- if self.parametres['svg'] or self.parametres['type_graph'] == 3 :
- self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
- else :
- self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
- self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
- self.graphpan.sizer_3.Fit(self.graphpan.panel_1)
- self.graphpan.Layout()
- self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL))
+ redosimi(self, evt)
+# with open(self.pathout['selected.csv'],'r') as f :
+# selected = f.read()
+# selected = [int(val) for val in selected.splitlines()]
+# if self.actives is None :
+# with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f :
+# self.actives = f.read()
+# self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()]
+# if os.path.exists(self.pathout['actives_nb.csv']) :
+# with open(self.pathout['actives_nb.csv'], 'r') as f :
+# act_nb = f.read()
+# act_nb = act_nb.splitlines()
+# dictcol = dict([[i, [self.actives[i], int(act_nb[i])]] for i, val in enumerate(self.actives)])
+# else :
+# dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)])
+# #res = SelectColumn(self.ira, dictcol, self.actives, self.pathout['selected.csv'], selected = selected, dlg = True)
+# #if res.ok :
+# prep = PrepSimi(self.ira, self, self.parametres,self.pathout['selected.csv'], self.actives, indices_simi, wordlist = dictcol, selected = selected)
+# if prep.val == wx.ID_OK :
+# self.parametres = prep.parametres
+#
+# script = PrintSimiScript(self)
+# script.make_script()
+# pid = exec_rcode(self.ira.RPath, script.scriptout, wait = True)
+# check_Rresult(self.ira, pid)
+# if self.parametres['type_graph'] in [1,3] :
+# if self.parametres['svg'] :
+# filename, ext = os.path.splitext(script.filename)
+# fileout = filename + '.svg'
+# elif self.parametres['type_graph'] == 3 :
+# fileout = script.filename
+# parametres = {'gexffile' : fileout,
+# 'dirout' : os.path.dirname(fileout),
+# 'titre': 'Le titre',
+# #'nodemin': self.param['txt_min'],
+# #'nodemax': self.param['txt_max'],
+# #'bargraphw' : 60*int(self.param['clnb']),
+# }
+# web = WebExport(self.ira, parametres)
+# fileout = web.exportsimi()
+# else :
+# fileout = script.filename
+# if os.path.exists(self.pathout['liste_graph']):
+# graph_simi = read_list_file(self.pathout['liste_graph'])
+# graph_simi.append([os.path.basename(fileout), script.txtgraph])
+# else :
+# graph_simi = [[os.path.basename(fileout), script.txtgraph]]
+# print_liste(self.pathout['liste_graph'], graph_simi)
+# DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira'])
+# if self.parametres['type_graph'] in [1,3] :
+# if self.parametres['svg'] or self.parametres['type_graph'] == 3 :
+# self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+# else :
+# self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+# self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
+# self.graphpan.sizer_3.Fit(self.graphpan.panel_1)
+# self.graphpan.Layout()
+# self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL))
def export(self, evt) :
nb = 1
} else {
V(graph)$weight <- graph.simi$label.cex
}
- V(graph)$color <- vertex.label.color
+ V(graph)$rcolor <- vertex.label.color
V(graph)$frequences <- graph.simi$mat.eff
V(graph)$label <- as.character(graph.simi$v.label)
E(graph)$weight <- graph.simi$we.width
write.graph(graph, fileout, format = 'graphml')
#saveAsGEXF(graph, filepath = fileout)
- """ % (self.pathout['RData.RData'], self.parent.RscriptsPath['simi'], fileout)
+ """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['simi']), fileout)
filetmp = tempfile.mktemp()
with open(filetmp, 'w') as f :
f.write(txt)
mss.ShowModal()
mss.Destroy()
+ def blender(self, evt):
+ blender(self)
+
+
class DefaultMatLayout :
def __init__(self, parent, tableau, parametres) :
self.pathout = PathOut(dirout = parametres['pathout'])
class FreqLayout(DefaultMatLayout) :
def dolayout(self) :
self.tab = wx.html.HtmlWindow(self.ira.nb, -1)
+ #self.tab = wx.html2.WebView.New(self)
res = normpath_win32(self.pathout['resultats.html']).replace('\\','/')
self.tab.LoadPage(res)
+ #self.tab.LoadURL(res)
self.tab.parametres = self.parametres
self.ira.nb.AddPage(self.tab, ' - '.join([_(u"Frequency").decode('utf8'), self.parametres['name']]))
self.tab.parametres = self.parametres
self.ira.nb.AddPage(self.tab, ' - '.join([u"Chi2", self.parametres['name']]))
#self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1)
- #self.ira.ShowAPane("Tab_content")
+ #self.ira.ShowAPane("Tab_content")
class ProtoLayout(DefaultMatLayout) :
self.indices = indices_simi
if os.path.exists(self.pathout['liste_graph']) :
list_graph = read_list_file(self.pathout['liste_graph'])
- else :
+ else :
list_graph = [['','']]
notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT
self.tabsimi = aui.AuiNotebook(self.parent.nb, -1, wx.DefaultPosition)
self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph)
self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc)
self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport)
+ self.graphpan.Bind(wx.EVT_BUTTON, self.blender, self.graphpan.butblender)
self.tabsimi.AddPage(self.graphpan, 'Graph')
self.tabsimi.parametres = self.parametres
self.parent.nb.AddPage(self.tabsimi, ' - '.join([_(u'Graph analysis').decode('utf8'), self.parametres['name']]))
graph_simi.append([os.path.basename(fileout), self.script.txtgraph])
else :
graph_simi = [[os.path.basename(fileout), self.script.txtgraph]]
- print_liste(self.pathout['liste_graph'], graph_simi)
+ print_liste(self.pathout['liste_graph'], graph_simi)
DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira'])
if self.parametres['type_graph'] == 1:
if self.parametres['svg'] :
self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL))
else :
self.dial.Destroy()
-
+
def make_param(self) :
if self.parametres['first'] :
'com' : self.dial.comcheck.GetValue(),
'communities' : self.dial.choix_com.GetSelection(),
'edgecurved' : self.dial.check_curved.GetValue(),
- }
+ }
if 'cexfromchi' in self.parametres :
paramsimi['cexfromchi'] = self.dial.checkit.GetValue()
if 'sfromchi' in self.parametres :
if self.parametres['type_graph'] == 1 :
graph = False
wait = False
- else :
+ else :
graph = True
wait = True
pid = exec_rcode(self.parent.RPath, self.tmpfile, wait = wait, graph = graph)
dlg.Pulse(u'R ...')
sleep(0.2)
check_Rresult(self.parent, pid)
-
- def export(self, evt) :
+
+ def export(self, evt) :
nb = 1
while os.path.exists(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')):
nb +=1
E(graph)$weight <- graph.simi$we.width
write.graph(graph, fileout, format = 'graphml')
#saveAsGEXF(graph, filepath = fileout)
- """ % (self.pathout['RData.RData'], self.parent.RscriptsPath['simi'], fileout)
+ """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['simi']), fileout)
filetmp = tempfile.mktemp()
with open(filetmp, 'w') as f :
f.write(txt)
mss.ShowModal()
mss.Destroy()
-
+ def blender(self, evt):
+ blender(self)
+
+
class GraphPanelSimi(wx.Panel):
def __init__(self,parent, dico, list_graph):
wx.Panel.__init__(self,parent)
self.butafc = wx.BitmapButton(self, -1, afc_img)
export_img = wx.Image(os.path.join(self.ira.images_path,'button_export.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap()
self.butexport = wx.BitmapButton(self, -1, export_img)
+ blender_img = wx.Image(os.path.join(self.ira.images_path,'button_blender.png'), wx.BITMAP_TYPE_ANY)
+ blender_img.Rescale(32,32)
+ blender_img = blender_img.ConvertToBitmap()
+ self.butblender = wx.BitmapButton(self, -1, blender_img)
for i in range(0,len(list_graph)):
if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) :
filename, ext = os.path.splitext(list_graph[i][0])
else :
self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY)))
self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1]))
- self.panel_1.Bind(wx.EVT_MOTION, self.onMouseMove)
+ self.panel_1.Bind(wx.EVT_MOTION, self.onMouseMove)
self.__set_properties()
self.__do_layout()
self.panel_1.SetScrollRate(20, 20)
self.panel_1.SetFocus()
- def __do_layout(self):
+ def __do_layout(self):
self.sizer_1 = wx.BoxSizer(wx.HORIZONTAL)
self.sizer_2 = wx.BoxSizer(wx.VERTICAL)
self.sizer_3 = wx.BoxSizer(wx.VERTICAL)
self.sizer_2.Add(self.butafc, 0, 0, 0)
self.sizer_2.Add(self.butexport, 0, 0, 0)
+ self.sizer_2.Add(self.butblender, 0, 0, 0)
for i in range(0, len(self.listimg)):
self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0)
self.panel_1.SetSizer(self.sizer_3)
self.sizer_1.Add(self.sizer_2, 0, wx.EXPAND, 0)
self.sizer_1.Add(self.panel_1, 1, wx.EXPAND, 0)
- self.SetSizer(self.sizer_1)
+ self.SetSizer(self.sizer_1)
def onMouseMove(self, event):
self.panel_1.SetFocus()
+