X-Git-Url: http://iramuteq.org/git?a=blobdiff_plain;ds=sidebyside;f=PrintRScript.py;h=9a920960cf7b613389e5ea332a84b4fea4c92ec6;hb=4e4210c1d2693e0333371ea269c5967d736a9eae;hp=e93501a185ea7ba8e2f6f36893238b4354a9ed1d;hpb=5d8a0a0e99d9075adc28f2525fe0aba8e14c2b0a;p=iramuteq diff --git a/PrintRScript.py b/PrintRScript.py index e93501a..9a92096 100644 --- a/PrintRScript.py +++ b/PrintRScript.py @@ -173,12 +173,12 @@ def RchdTxt(DicoPath, RscriptPath, mincl, classif_mode, nbt = 9, libsvdc = False """ % DicoPath['listeuce2'] txt += """ -# rm(data1) + rm(data1) """ if classif_mode == 0: txt += """ -# rm(data2) + rm(data2) """ txt += """ chd.result <- Rchdtxt("%s",mincl=%i,classif_mode=%i, nbt = nbt) @@ -275,7 +275,7 @@ def RchdQuest(DicoPath, RscriptPath, nbcl = 10, mincl = 10): chd.result<-Rchdquest("%s","%s","%s", nbt = nbt, mincl = mincl) n1 <- chd.result$n1 classeuce1 <- chd.result$cuce1 - """ % (DicoPath['Act01'], DicoPath['listeuce1'], DicoPath['uce']) + """ % (DicoPath['mat01'], DicoPath['listeuce1'], DicoPath['uce']) txt += """ tree_tot1 <- make_tree_tot(chd.result$chd) @@ -378,6 +378,10 @@ write.csv2(gbcluster,file="%s") xmax <- max(afc$rowcoord[,1], na.rm = TRUE) + (0.1 * max(afc$rowcoord[,1], na.rm = TRUE)) ymin <- min(afc$rowcoord[,2], na.rm = TRUE) + (0.1 * min(afc$rowcoord[,2], na.rm = TRUE)) ymax <- max(afc$rowcoord[,2], na.rm = TRUE) + (0.1 * max(afc$rowcoord[,2], na.rm = TRUE)) + print(xmin) + print(xmax) + print(ymin) + print(ymax) """ % taillecar txt += """ PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='coord', deb=1, fin=(debsup-1), xlab = xlab, ylab = ylab, xmin=xmin, xmax=xmax, ymin = ymin, ymax=ymax) @@ -431,6 +435,9 @@ def write_afc_graph(self): if self.param['tchi'] : tchi = 'TRUE' else : tchi = 'FALSE' + if self.param['svg'] : svg = 'TRUE' + else : svg = 'FALSE' + with open(self.RscriptsPath['afc_graph'], 'r') as f: txt = f.read() @@ -460,7 +467,8 @@ def write_afc_graph(self): tchi,\ self.param['tchi_min'],\ self.param['tchi_max'],\ - ffr(os.path.dirname(self.fileout))) + ffr(os.path.dirname(self.fileout)),\ + svg) return scripts def print_simi3d(self): @@ -554,7 +562,7 @@ def barplot(table, rownames, colnames, rgraph, tmpgraph, intxt = False) : if (valmin >=0) { valmin <- -2 } else { - valmin <- valmin -2 + valmin <- valmin - 2 } di[tominf] <- valmin }