From e4cdc5c347afd236e4aba37ce2fa3250bed7ef1f Mon Sep 17 00:00:00 2001
From: Pierre Ratinaud <ratinaud@univ-tlse2.fr>
Date: Wed, 19 Jun 2024 12:23:22 +0200
Subject: [PATCH] correction prototypical analysis
---
PrintRScript.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/PrintRScript.py b/PrintRScript.py
index 0be3eff..e005361 100755
--- a/PrintRScript.py
+++ b/PrintRScript.py
@@ -1243,7 +1243,7 @@ class ProtoScript(PrintRScript):
}
mat <- read.csv2("%s", header = FALSE, row.names=1, sep='\t', quote='"', dec='.')
open_file_graph("%s",height=800, width=1000)
- prototypical(mat, mfreq = %s, mrank = %s, cloud = FALSE, cexrange=c(1,2.4), cexalpha= c(0.4, 1), type = '%s', mat.col.path='/tmp/matcol.csv')
+ prototypical(mat, mfreq = %s, mrank = %s, cloud = FALSE, cexrange=c(1,2.4), cexalpha= c(0.4, 1), type = '%s')#, mat.col.path='/tmp/matcol.csv')
dev.off()
""" % (ffr(self.analyse.pathout['table.csv']), ffr(self.analyse.pathout['proto.png']), self.parametres['limfreq'], self.parametres['limrang'], self.parametres['typegraph'])
self.add(txt)
--
2.7.4