1 #Author: Pierre Ratinaud
2 #Copyright (c) 20010 Pierre Ratinaud
6 #fichier genere par IRaMuTeq
19 do.select.chi.classe <- %s
39 xlab <- paste('facteur ', x, ' -')
40 ylab <- paste('facteur ', y, ' -')
41 if (!typegraph == 0) {zlab <- paste('facteur ', z, ' -')}
42 xlab <- paste(xlab,round(afc_table$facteur[x,2],2),sep = ' ')
43 xlab <- paste(xlab,' %%',sep = '')
44 ylab <- paste(ylab,round(afc_table$facteur[y,2],2),sep = ' ')
45 ylab <- paste(ylab,' %%',sep = '')
46 if (!typegraph == 0) {
47 zlab <- paste(zlab,round(afc_table$facteur[z,2],2),sep = ' ')
48 zlab <- paste(zlab,' %%',sep = '')
52 if ( what == 0 ) table.in <- afc$colcoord
53 if ( what == 1 ) table.in <- afc$colcrl
54 rownames(table.in) <- afc$colnames
56 table.in<-table.in[,c(x,y)]
58 table.in<-table.in[,c(x,y,z)]
59 rx <- range(table.in[,1], na.rm = TRUE)
60 ry <- range(table.in[,2], na.rm = TRUE)
61 rz <- range(table.in[,3], na.rm = TRUE)
65 cex.par <- rep(taillecar/10, nrow(table.in))
67 if ( what == 0 ) table.in <- afc$rowcoord
68 if ( what == 1 ) table.in <- afc$rowcrl
69 rownames(table.in) <- afc$rownames
70 tablechi <- chistabletot
73 table.in<-table.in[,c(x,y)]
75 table.in<-table.in[,c(x,y,z)]
76 rx <- range(table.in[,1], na.rm = TRUE)
77 ry <- range(table.in[,2], na.rm = TRUE)
78 rz <- range(table.in[,3], na.rm = TRUE)
80 if (!is.null(debsup)) {
82 table.in <- table.in[1:(debsup-1),]
83 tablechi <- tablechi[1:(debsup-1),]
84 cex.par <- afc$rowmass[1:(debsup-1)]
87 table.in <- table.in[debsup:(debet-1),]
88 tablechi <- tablechi[debsup:(debet-1),]
89 #cex.par <- afc$rowmass[debsup:(debet-1)]
92 table.in <- table.in[debet:nrow(table.in),]
93 tablechi <- tablechi[debet:nrow(tablechi),]
94 #cex.par <- afc$rowmass[debet:nrow(tablechi)]
98 if (is.null(debsup)) {
100 if (!is.null(debet)) {
101 table.in <- table.in[1:(debet-1),]
102 tablechi <- tablechi[1:(debet-1),]
103 cex.par <- afc$rowmass[1:(debet-1)]
105 cex.par <- afc$rowmass
108 table.in <- table.in[debet:nrow(table.in),]
109 tablechi <- tablechi[debet:nrow(tablechi),]
110 #cex.par <- afc$rowmass[debet:nrow(tablechi)]
115 if (select.nb > nrow(table.in)) select.nb <- nrow(table.in)
116 row.keep <- select_point_nb(tablechi, select.nb)
117 table.in <- table.in[row.keep,]
118 tablechi <- tablechi[row.keep,]
119 } else if (do.select.chi) {
120 if (select.chi > max(tablechi)) select.chi <- max(tablechi)
121 row.keep <- select_point_chi(tablechi, select.chi)
122 table.in <- table.in[row.keep,]
123 tablechi <- tablechi[row.keep,]
124 } else if (do.select.chi.classe) {
125 row.keep <- select.chi.classe(tablechi, ptbycluster)
126 table.in <- table.in[row.keep,]
127 tablechi <- tablechi[row.keep,]
129 row.keep <- 1:nrow(table.in)
131 classes <- apply(tablechi, 1, which.max)
132 maxchi <- apply(tablechi, 1, max)
133 infp <- which(is.infinite(maxchi) & maxchi > 0)
136 valmax <- max(maxchi, na.rm = TRUE)
137 maxchi[infp] <- valmax + 2
140 #row.keep <- append(row.keep, rn.keep)
141 #row.keep <- unique(row.keep)
142 cex.par <- cex.par[row.keep]
143 cex.par <- norm.vec(cex.par, txt.min/10, txt.max/10)
146 cex.par <- norm.vec(cex.par, tchi.min/10, tchi.max/10)
148 cex.par <- rep(taillecar/10, nrow(table.in))
153 if (typegraph == 0) {
155 open_file_graph(fileout, width = width, height = height)
156 parcex <- taillecar/10
159 table.in <- table.in[order(cex.par, decreasing = TRUE),]
160 classes <- classes[order(cex.par, decreasing = TRUE)]
161 cex.par <- cex.par[order(cex.par, decreasing = TRUE)]
162 table.in <- stopoverlap(table.in, cex.par=cex.par)
163 classes <- classes[table.in[,4]]
164 cex.par <- cex.par[table.in[,4]]
166 make_afc_graph(table.in, classes, clnb, xlab, ylab, cex.txt = cex.par)
170 vire.nonascii <- function(rnames) {
171 print('vire non ascii')
172 couple <- list(c('é','e'),
193 rnames<-gsub(c[1],c[2], rnames)
198 #rn <- vire.nonascii(rownames(table.in))
199 rn <- rownames(table.in)
202 #par3d(windowRect = c(100,100,600,600))
203 rgl.bg(col = c('white', "#99bb99"), front = "lines", box=FALSE, sphere = TRUE)
204 rgl.lines(c(rx), c(0, 0), c(0, 0), col = "#000000")
205 rgl.lines(c(0,0),c(ry),c(0,0),col = "#000000")
206 rgl.lines(c(0,0),c(0,0),c(rz),col = "#000000")
207 text3d(rx[2]+1,0,0, xlab)
208 text3d(0,ry[2]+1,0, ylab)
209 text3d(0,0,rz[2]+1, zlab)
212 maxchi <- norm.vec(maxchi, tchi.min/100, tchi.max/100)
213 } else if (!is.null(cex.par)) {
214 maxchi <- norm.vec(cex.par, txt.min/100, txt.max/100)
218 colors = rain[classes]
219 text3d(table.in[,1], table.in[,2], table.in[,3], rn, col= colors , cex = cex.par)
221 text3d(rx[2],(ry[2]+(0.2*i)),0,paste('classe',i),col=rain[i])
224 # rgl.spheres(table.in, col = colors, radius = maxchi, alpha = alpha)
229 ReturnVal <- tkmessageBox(title="RGL 3 D",message="Cliquez pour commencer le film",icon="info",type="ok")
231 movie3d(spin3d(axis=c(0,1,0),rpm=6), movie = 'film', frames = "tmpfilm", duration=10, clean=TRUE, top = TRUE, dir = dirout)
232 ReturnVal <- tkmessageBox(title="RGL 3 D",message="Fini !",icon="info",type="ok")
236 ReturnVal <- tkmessageBox(title="RGL 3 D",message="Cliquez pour fermer",icon="info",type="ok")