# -*- coding: utf-8 -*-
#Author: Pierre Ratinaud
#Copyright (c) 2008-2009 Pierre Ratinaud
-#Lisense: GNU/GPL
+#License: GNU/GPL
-from chemins import ConstructPathOut, ChdTxtPathOut, ConstructAfcUciPath, ffr
+from chemins import ConstructPathOut, ChdTxtPathOut, ConstructAfcUciPath, ffr, PathOut
from functions import sortedby, CreateIraFile, print_liste, exec_rcode, check_Rresult
from PrintRScript import RchdQuest
from layout import OpenCHDS, PrintRapport
from dialog import PrefQuestAlc
+from analysematrix import AnalyseMatrix
import os
import sys
import wx
-from numpy import *
import tempfile
import time
-class AnalyseQuest():
- def __init__(self, parent):
- dlg = PrefQuestAlc(parent)
- dlg.CenterOnParent()
- self.val = dlg.ShowModal()
- if self.val == wx.ID_OK :
- if dlg.m_radioBox1.GetSelection() == 1 :
- ListAct = dlg.nactives
- ListSup = dlg.varsup
- nbcl_p1 = dlg.spin_nbcl.GetValue()
- mincl = dlg.spin_mincl.GetValue()
- DoQuestAlceste(parent, ListAct, ListSup, nbcl = nbcl_p1, mincl = mincl)
- else:
- nbcl_p1 = dlg.spin_nbcl.GetValue()
- mincl = dlg.spin_mincl.GetValue()
- DoQuestAlceste(parent, nbcl = nbcl_p1, mincl = mincl)
+class AnalyseQuest(AnalyseMatrix):
+ def doparametres(self, dlg = None):
+ if dlg is not None :
+ dial = PrefQuestAlc(self.parent, self.tableau)
+ dial.CenterOnParent()
+ self.val = dial.ShowModal()
+ #parametres = self.tableau.parametre
+ if self.val == wx.ID_OK :
+ self.parametres['nbcl_p1'] = dial.spin_nbcl.GetValue()
+ self.parametres['mincl'] = dial.spin_mincl.GetValue()
+ if dial.m_radioBox1.GetSelection() == 1 :
+ self.parametres['listact'] = dial.nactives
+ self.parametres['listsup'] = dial.varsup
+ else :
+ self.parametres['formatted'] = 1
+ else :
+ self.parametres = None
+ dial.Destroy()
+ # DoQuestAlceste(parent, parametres)
-class DoQuestAlceste:
- def __init__(self, parent, ListAct=False, ListSup=False, nbcl = 10, mincl = 10):
- self.t1 = time.time()
-#-------------------------------------------------------------------
- dlg = wx.ProgressDialog("Traitements",
- "Veuillez patienter...",
- maximum=5,
- parent=parent,
- style=wx.PD_APP_MODAL | wx.PD_AUTO_HIDE | wx.PD_ELAPSED_TIME
- )
- dlg.Center()
- count = 1
- keepGoing = dlg.Update(count)
-#-------------------------------------------------------------------
- self.pathout = ConstructPathOut(parent.tableau.parametre['filename'], 'AlcesteQuest')
+#class DoQuestAlceste(AnalyseMatrix):
+ def doanalyse(self):
+ #parametres['pathout'] = ConstructPathOut(parent.tableau.parametre['filename'], 'ReinertMatrix')
+ #self.parametres = parametres
+ #self.parametres['type'] = 'reinertmatrix'
self.DictForme = {}
self.DictFormeSup = {}
self.Min = 10
self.Linecontent = []
- self.parent = parent
- self.RPath = self.parent.PathPath.get('PATHS', 'rpath')
- self.dictpathout = ChdTxtPathOut(self.pathout)
- self.parent.tableau.dictpathout = self.dictpathout
+ #self.parent = parent
+ #self.RPath = self.parent.PathPath.get('PATHS', 'rpath')
+ #self.dictpathout = PathOut(dirout = self.pathout)
+ #self.dictpathout = self.pathout
+ #self.dictpathout.basefiles(ChdTxtPathOut)
+ #self.pathout = self.dictpathout
self.clnb = ''
- self.ListAct = ListAct
+ self.ListAct = self.parametres.get('listact', False)
self.ucecla = ''
- self.parent = parent
+ #dlg = wx.ProgressDialog("Traitements",
+ # "Veuillez patienter...",
+ # maximum=5,
+ # parent=self.parent,
+ # style=wx.PD_APP_MODAL | wx.PD_AUTO_HIDE | wx.PD_ELAPSED_TIME
+ # )
+
+ #AnalyseMatrix.__init__(self, parent, parent.tableau, self.parametres, dlg = dlg)
+
+
+
#-----------------------------------------------------------
+# def doanalyse(self) :
+#-------------------------------------------------------------------
+ #self.dictpathout = self.pathout
+ self.pathout.basefiles(ChdTxtPathOut)
+ self.tableau.pathout.basefiles(ChdTxtPathOut)
+# self.parent.tableau.dictpathout = self.dictpathout
+
+ self.dlg.Center()
+ count = 1
+ keepGoing = self.dlg.Update(count)
+#-------------------------------------------------------------------
count += 1
- dlg.Update(count, u"passage en O/1")
- if not ListAct:
- self.parent.tableau.make_01_alc_format(self.dictpathout['Act01'])
+ self.dlg.Update(count, u"passage en O/1")
+ if 'formatted' in self.parametres:
+ self.tableau.make_01_alc_format(self.pathout['mat01.csv'])
else:
- self.parent.tableau.make_01_from_selection(ListAct, ListSup)
- file = open(self.dictpathout['listeuce1'], 'w')
+ print self.parametres['listsup']
+ self.tableau.make_01_from_selection(self.parametres['listact'], self.parametres['listsup'])
+ file = open(self.pathout['listeuce1'], 'w')
file.write('num uce;num uc\n')
- for i in range(0, len(self.parent.tableau.linecontent)):
+ for i in range(0, len(self.tableau.linecontent)):
file.write('%i;%i\n' % (i, i))
file.close()
- self.nbind = len(self.parent.tableau.linecontent)
+ self.nbind = len(self.tableau.linecontent)
#------------------------------------------------------------
- RchdQuest(self.dictpathout, parent.RscriptsPath, nbcl, mincl)
+ RchdQuest(self.pathout, self.parent.RscriptsPath, self.parametres['nbcl_p1'], self.parametres['mincl'])
#------------------------------------------------------------
count += 1
- dlg.Update(count, u"Analyse (patientez...)")
+ self.dlg.Update(count, u"Analyse (patientez...)")
- pid = exec_rcode(self.RPath, self.dictpathout['Rchdquest'], wait = False)
+ pid = exec_rcode(self.parent.RPath, self.pathout['Rchdquest'], wait = False)
while pid.poll() == None :
- dlg.Pulse(u"Analyse (patientez...)")
+ self.dlg.Pulse(u"Analyse (patientez...)")
time.sleep(0.2)
check_Rresult(self.parent, pid)
#------------------------------------------------------------
count += 1
- dlg.Update(count, u"Ecriture des résultats")
- self.parent.tableau.buildprofil()
- self.clnb = self.parent.tableau.clnb
- self.ucecla = self.parent.tableau.ucecla
+ self.dlg.Update(count, u"Ecriture des résultats")
+ self.tableau.buildprofil()
+ self.clnb = self.tableau.clnb
+ self.parametres['clnb'] = self.clnb
+ self.ucecla = self.tableau.ucecla
self.BuildProfile()
temps = time.time() - self.t1
- PrintRapport(self, 'quest')
- self.parent.tableau.save_tableau(self.dictpathout['db'])
- CreateIraFile(self.dictpathout, self.clnb, corpname = os.path.basename(parent.filename), section = 'questionnaire')
- afc_graph_list = [[os.path.basename(self.dictpathout['AFC2DL_OUT']), u'Variables actives - coordonnées - facteurs 1 / 2'],
- [os.path.basename(self.dictpathout['AFC2DSL_OUT']), u'variables illustratives - coordonnées - facteurs 1 / 2'],
- [os.path.basename(self.dictpathout['AFC2DCL_OUT']), u'Classes - Coordonnées - facteur 1 / 2'],
- [os.path.basename(self.dictpathout['AFC2DCoul']), u'Variables actives - Corrélation - facteur 1/2'],
- [os.path.basename(self.dictpathout['AFC2DCoulSup']), u'Variables illustratives - Corrélation - facteur 1 / 2'],
- [os.path.basename(self.dictpathout['AFC2DCoulCl']), u'Classes - Corrélations - facteurs 1 / 2'], ]
- chd_graph_list = [[os.path.basename(self.dictpathout['dendro1']), u'dendrogramme à partir de chd1']]
- chd_graph_list.append([os.path.basename(self.dictpathout['arbre1']), u'chd1'])
- print_liste(self.dictpathout['liste_graph_afc'], afc_graph_list)
- print_liste(self.dictpathout['liste_graph_chd'], chd_graph_list)
+ PrintRapport(self, self, {}, istxt = False)
+ self.tableau.save_tableau(self.pathout['db'])
+ #CreateIraFile(self.dictpathout, self.clnb, corpname = os.path.basename(self.parent.filename), section = 'questionnaire')
+ afc_graph_list = [[os.path.basename(self.pathout['AFC2DL_OUT']), u'Variables actives - coordonnées - facteurs 1 / 2'],
+ [os.path.basename(self.pathout['AFC2DSL_OUT']), u'variables illustratives - coordonnées - facteurs 1 / 2'],
+ [os.path.basename(self.pathout['AFC2DCL_OUT']), u'Classes - Coordonnées - facteur 1 / 2'],]
+ chd_graph_list = [[os.path.basename(self.pathout['dendro1']), u'dendrogramme à partir de chd1']]
+ chd_graph_list.append([os.path.basename(self.pathout['arbre1']), u'chd1'])
+ print_liste(self.pathout['liste_graph_afc'], afc_graph_list)
+ print_liste(self.pathout['liste_graph_chd'], chd_graph_list)
- self.tableau = self.parent.tableau
- OpenCHDS(self.parent, self, self.dictpathout['ira'], False)
+ #self.tableau = self.parent.tableau
+ #OpenCHDS(self.parent, self, self.dictpathout['ira'], False)
#------------------------------------------------------------
print 'fini', time.time() - self.t1
count += 1
- dlg.Update(count, "Fini")
+ self.dlg.Update(count, "Fini")
def BuildProfile(self):
print 'build profile'
""" % self.parent.RscriptsPath['chdfunct']
txt += """
load("%s")
- """ % self.dictpathout['RData']
+ """ % self.pathout['RData']
txt += """
dataact<-read.csv2("%s", header = FALSE, sep = ';',quote = '\"', row.names = 1, na.strings = 'NA')
- """ % self.dictpathout['Contout']
+ """ % self.pathout['Contout']
txt += """
dataet<-read.csv2("%s", header = FALSE, sep = ';',quote = '\"', row.names = 1, na.strings = 'NA')
- """ % self.dictpathout['ContEtOut']
+ """ % self.pathout['ContEtOut']
txt += """
clnb<-%i
""" % self.clnb
tablesqrpact<-BuildProf(as.matrix(dataact),n1,clnb)
tablesqrpet<-BuildProf(as.matrix(dataet),n1,clnb)
PrintProfile(n1,tablesqrpact[4],tablesqrpet[4],tablesqrpact[5],tablesqrpet[5],%i,"%s","%s")
- """ % (self.clnb, self.dictpathout['PROFILE_OUT'], self.dictpathout['ANTIPRO_OUT'])
+ """ % (self.clnb, self.pathout['PROFILE_OUT'], self.pathout['ANTIPRO_OUT'])
txt += """
colnames(tablesqrpact[[2]])<-paste('classe',1:clnb,sep=' ')
colnames(tablesqrpact[[1]])<-paste('classe',1:clnb,sep=' ')
ptabletot<-rbind(as.data.frame(tablesqrpact[1]),as.data.frame(tablesqrpet[1]))
gbcluster<-n1
write.csv2(chistabletot,file="%s")
- """ % self.dictpathout['chisqtable']
+ """ % self.pathout['chisqtable']
txt += """
write.csv2(ptabletot,file="%s")
- """ % self.dictpathout['ptable']
+ """ % self.pathout['ptable']
txt += """
write.csv2(gbcluster,file="%s")
- """ % self.dictpathout['SbyClasseOut']
+ """ % self.pathout['SbyClasseOut']
if self.clnb > 2 :
txt += """
library(ca)
write.csv2(afc_table$facteur, file = "%s")
write.csv2(afc_table$colonne, file = "%s")
write.csv2(afc_table$ligne, file = "%s")
- """ % (self.dictpathout['afc_facteur'], self.dictpathout['afc_col'], self.dictpathout['afc_row'])
+ """ % (self.pathout['afc_facteur'], self.pathout['afc_col'], self.pathout['afc_row'])
txt += """
xlab <- paste('facteur 1 - ', round(afc$facteur[1,2],2), sep = '')
PARCEX<-%s
""" % "0.9"
txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='coord', deb=1, fin=(debet-1), xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DL_OUT'])
- txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='coord', deb=debet, fin=fin, xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DSL_OUT'])
- txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", col = TRUE, what='coord', xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DCL_OUT'])
- txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='crl', deb=1, fin=(debet-1), xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DCoul'])
+ xyminmax <- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='coord', deb=1, fin=(debet-1), xlab = xlab, ylab = ylab)
+ """ % (self.pathout['AFC2DL_OUT'])
txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='crl', deb=debet, fin=fin, xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DCoulSup'])
+ PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", what='coord', deb=debet, fin=fin, xlab = xlab, ylab = ylab, xmin = xyminmax$xminmax[1], xmax = xyminmax$xminmax[2], ymin = xyminmax$yminmax[1], ymax = xyminmax$yminmax[2])
+ """ % (self.pathout['AFC2DSL_OUT'])
txt += """
- PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", col = TRUE, what='crl', xlab = xlab, ylab = ylab)
- """ % (self.dictpathout['AFC2DCoulCl'])
+ PlotAfc2dCoul(afc, as.data.frame(chistabletot), "%s", col = TRUE, what='coord', xlab = xlab, ylab = ylab, xmin = xyminmax$xminmax[1], xmax = xyminmax$xminmax[2], ymin = xyminmax$yminmax[1], ymax = xyminmax$yminmax[2])
+ """ % (self.pathout['AFC2DCL_OUT'])
txt += """
save.image(file="%s")
- """ % self.dictpathout['RData']
+ """ % self.pathout['RData']
tmpfile = tempfile.mktemp(dir=self.parent.TEMPDIR)
tmpscript = open(tmpfile, 'w')
tmpscript.write(txt)
projects / iramuteq / blobdiff