X-Git-Url: http://iramuteq.org/git?p=iramuteq;a=blobdiff_plain;f=layout.py;h=90c9a61a846a5a967cf0a3ec1c0e83473b144ef3;hp=bee04eeed304653eb87f9c1f731db4dd84f3f751;hb=92a466bbcce38b41c037e71fe268b718feb42eba;hpb=1f82fb8e9ed83b8524b00039f1a8c51c2b12a8be diff --git a/layout.py b/layout.py index bee04ee..90c9a61 100644 --- a/layout.py +++ b/layout.py @@ -2,33 +2,40 @@ # -*- coding: utf-8 -*- #Author: Pierre Ratinaud #Copyright (c) 2008-2009 Pierre Ratinaud -#Lisense: GNU/GPL +#License: GNU/GPL import os import wx -#import wx.lib.agw.aui as aui -import agw.aui as aui +import wx.lib.hyperlink as hl +import wx.lib.agw.aui as aui +import wx.lib.agw.labelbook as LB +from wx.lib.agw.fmresources import * from chemins import ConstructPathOut, ChdTxtPathOut, FFF, ffr, PathOut, StatTxtPathOut, simipath from ConfigParser import ConfigParser -from functions import ReadProfileAsDico, GetTxtProfile, read_list_file, ReadList, exec_rcode, print_liste, BugReport, DoConf, indices_simi -from ProfList import * +from functions import ReadProfileAsDico, GetTxtProfile, read_list_file, ReadList, exec_rcode, print_liste, BugReport, DoConf, indices_simi, check_Rresult, progressbar, normpath_win32, TGen +from ProfList import ProfListctrlPanel from guiparam3d import param3d, simi3d from PrintRScript import write_afc_graph, print_simi3d, PrintSimiScript -from profile_segment import * -from functions import ReadList +from profile_segment import ProfileSegment +from functions import ReadList, launchcommand from listlex import * from Liste import * from search_tools import SearchFrame -from dialog import PrefGraph, PrefExport, PrefSimpleFile, PrefDendro -from guifunct import SelectColumn, PrepSimi -from corpusNG import Corpus +from dialog import PrefGraph, PrefExport, PrefSimpleFile, PrefDendro, SimpleDialog, ImageViewer +from guifunct import SelectColumn, PrepSimi, PrefSimi, redosimi +from webexport import WebExport +from corpus import Corpus +from sheet import MySheet import datetime import sys import tempfile +from time import sleep import shutil -import webbrowser import codecs import logging +import gettext +from graph_to_json import GraphToJson +_ = gettext.gettext log = logging.getLogger('iramuteq.layout') @@ -42,9 +49,11 @@ class GraphPanelAfc(wx.Panel): self.coding = coding self.itempath = itempath self.parent = self.GetParent()#parent - self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) + self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "Arial")) self.labels = [] self.listimg = [] + self.buts = [] + self.list_graph = list_graph self.TabCHD = self.parent.GetParent() self.nb = self.TabCHD.GetParent() self.ira = self.nb.GetParent() @@ -53,12 +62,28 @@ class GraphPanelAfc(wx.Panel): self.butafc = wx.BitmapButton(self, -1, afc_img) self.Bind(wx.EVT_BUTTON, self.afc_graph, self.butafc) self.dirout = os.path.dirname(self.Dict['ira']) + b = 0 + todel = [] for i in range(0,len(list_graph)): if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) : - self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) - self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1])) - - self.param = { 'typegraph' : 0, + filename, ext = os.path.splitext(list_graph[i][0]) + if ext == '.svg' or ext == '.html': + self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0]))) + else : + self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY), name=`i-b`)) + self.listimg[-1].Bind(wx.EVT_RIGHT_DOWN, self.onrightclick) + if os.path.exists(os.path.join(self.dirout,list_graph[i][0] + '_notplotted.csv')) : + txt = _(u"List of not plotted points : ").decode('utf8') + '%s' % os.path.join(self.dirout,list_graph[i][0] + '_notplotted.csv') + else : + txt = '' + self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1] + txt)) + self.buts.append(wx.Button(self.panel_1, wx.ID_DELETE, name = `i - b`)) + else : + todel.append(i) + b += 1 + self.list_graph = [graph for i, graph in enumerate(self.list_graph) if i not in todel] + + self.param = { 'typegraph' : 0, 'width' : 800, 'height' : 800, 'what' : 0, @@ -69,7 +94,7 @@ class GraphPanelAfc(wx.Panel): 'select_nb' : 50, 'select_chi' : 4, 'nbchic' : 30, - 'over' : 0, + 'over' : 0, 'cex_txt' : 0, 'txt_min' : 5, 'txt_max' : 40, @@ -80,7 +105,8 @@ class GraphPanelAfc(wx.Panel): 'facteur' : [1,2,3], 'alpha' : 10, 'clnb' : clnb, - } + 'svg' : 0, + } self.__set_properties() self.__do_layout() @@ -89,8 +115,9 @@ class GraphPanelAfc(wx.Panel): self.panel_1.EnableScrolling(True,True) #self.panel_1.SetSize((1000,1000)) self.panel_1.SetScrollRate(20, 20) + self.panel_1.SetFocus() - def __do_layout(self): + def __do_layout(self): self.sizer_1 = wx.BoxSizer(wx.VERTICAL) self.sizer_2 = wx.BoxSizer(wx.HORIZONTAL) self.sizer_3 = wx.BoxSizer(wx.VERTICAL) @@ -98,20 +125,72 @@ class GraphPanelAfc(wx.Panel): for i in range(0, len(self.listimg)): self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.sizer_3.Add(self.buts[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.Bind(wx.EVT_BUTTON, self.on_delete_image, self.buts[i]) self.panel_1.SetSizer(self.sizer_3) self.sizer_2.Add(self.panel_1, 1, wx.EXPAND, 0) - self.SetSizer(self.sizer_2) + self.SetSizer(self.sizer_2) + + def on_delete_image(self, event) : + image_id = int(event.GetEventObject().GetName()) + image_path = self.list_graph[image_id][0] + message = _(u'This file will be delete : ') + '%s.\n' % os.path.join(self.dirout, image_path) + _('Are you sure ?') + dial = wx.MessageDialog(self, message, style = wx.YES_NO) + res = dial.ShowModal() + if res == wx.ID_YES : + dial.Destroy() + log.info('delete image %i' % image_id) + oldimg = self.listimg.pop(image_id) + oldimg.Destroy() + oldlab = self.labels.pop(image_id) + oldlab.Destroy() + oldbut = self.buts.pop(image_id) + oldbut.Show(False) + for i, but in enumerate(self.buts) : + but.SetName(`i`) + self.listimg[i].SetName(`i`) + todel = self.list_graph.pop(image_id) + os.remove(os.path.join(self.dirout, todel[0])) + print_liste(self.Dict[self.itempath], self.list_graph) + self.sizer_3.Fit(self.panel_1) + self.Layout() + else : + dial.Destroy() + + def onrightclick(self, event): + image_id = int(event.GetEventObject().GetName()) + image_path = self.list_graph[image_id][0] + viewer = ImageViewer(self, {'tmpgraph' : os.path.join(self.dirout,image_path), 'svg': 'FALSE', 'wildcard': '*.*'}, self.labels[image_id].GetLabelText(), self.listimg[image_id].GetSize()) + viewer.Show() + #print image_path + #print self.labels[image_id].GetLabelText() def afc_graph(self,event): #dirout = os.path.dirname(self.Dict['ira']) - while os.path.exists(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+'.png')): - self.afcnb +=1 - self.fileout = ffr(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+'.png')) dial = PrefGraph(self.parent,-1,self.param,'') dial.CenterOnParent() val = dial.ShowModal() if val == wx.ID_OK : - self.param = {'typegraph' : dial.choicetype.GetSelection(), + if dial.choix_format.GetSelection() == 0 : + svg = 0 + else : + svg = 1 + typegraph = dial.choicetype.GetSelection() + if svg : + typefile = '.svg' + else : + typefile = '.png' + if self.clnb <= 3 and typegraph == 1 : + typegraph = 2 + if typegraph == 2: + typefile = '.gexf' + if typegraph == 3 : + typefile = '' + while os.path.exists(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+typefile)): + self.afcnb +=1 + self.fileout = ffr(os.path.join(self.dirout,'graph_afc_'+str(self.afcnb)+typefile)) + + self.param = {'typegraph' : typegraph, 'width' : dial.spin1.GetValue(), 'height' : dial.spin2.GetValue(), 'what' : dial.choice1.GetSelection(), @@ -122,7 +201,7 @@ class GraphPanelAfc(wx.Panel): 'select_nb' : dial.spin_nb.GetValue(), 'select_chi' : dial.spin_chi.GetValue(), 'nbchic' : dial.spin_nbchic.GetValue(), - 'over' : dial.check3.GetValue(), + 'over' : dial.check3.GetValue(), 'cex_txt' : dial.check4.GetValue(), 'txt_min' : dial.spin_min.GetValue(), 'txt_max' : dial.spin_max.GetValue(), @@ -133,26 +212,21 @@ class GraphPanelAfc(wx.Panel): 'facteur' : [dial.spin_f1.GetValue(),dial.spin_f2.GetValue(), dial.spin_f3.GetValue()], 'clnb' : self.clnb, 'film' : str(dial.film.GetValue()).upper(), - 'alpha' : dial.slider_sphere.GetValue() + 'alpha' : dial.slider_sphere.GetValue(), + 'svg' : svg } self.nb.parent = self.ira self.DictPathOut = self.Dict self.RscriptsPath = self.ira.RscriptsPath txt = """ load("%s") - """ % self.DictPathOut['RData'] + """ % ffr(self.DictPathOut['RData']) if self.itempath == 'liste_graph_afcf' : txt += """ afc <- afcf afc_table <- afcf_table chistabletot <- specfp - infp <- which(is.infinite(chistabletot) & chistabletot > 0) - infm <- which(is.infinite(chistabletot) & chistabletot < 0) - chistabletot[infp] <- 0 - chistabletot[infm] <- 0 - chistabletot[infp] <- max(chistabletot) + 1 - chistabletot[infm] <- min(chistabletot) - 1 - """ + """ elif self.itempath == 'liste_graph_afct' : txt +=""" afc <- afct @@ -161,12 +235,11 @@ class GraphPanelAfc(wx.Panel): """ txt += write_afc_graph(self) filetmp = tempfile.mktemp() - file = open(filetmp,'w') - file.write(txt) - file.close() + with open(filetmp, 'w') as f : + f.write(txt) pid = exec_rcode(self.ira.RPath, filetmp) check_Rresult(self.ira, pid) - if self.param['typegraph'] == 0 : + if self.param['typegraph'] != 1 : txt = 'Variables ' if self.param['qui'] == 0 : value = u'actives' if self.param['qui'] == 1 : value = u'supplémentaires' @@ -181,16 +254,57 @@ class GraphPanelAfc(wx.Panel): if self.param['over'] : txt += u' - Eviter les recouvrements' if self.param['cex_txt'] : txt += u' - taille du texte proportionnel à la masse' if self.param['tchi'] : txt += u' - taille du texte proportionnel au chi2 d\'association' - list_graph = read_list_file(self.DictPathOut[self.itempath], self.coding) - list_graph.append([self.fileout, txt]) - print_liste(self.DictPathOut[self.itempath], list_graph) - self.sizer_3.Add(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) - self.sizer_3.Add(wx.StaticText(self.panel_1,-1, txt), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + #list_graph = read_list_file(self.DictPathOut[self.itempath], self.coding) + if self.param['svg'] : + filename, ext = os.path.splitext(self.fileout) + self.fileout = filename + '.svg' + if self.param['typegraph'] == 2 : + parametres = {'gexffile' : self.fileout, + 'titre': 'Le titre', + 'nodemin': self.param['txt_min'], + 'nodemax': self.param['txt_max'], + 'bargraphw' : 60*int(self.param['clnb']), + } + web = WebExport(self.ira, parametres) + self.fileout = web.exportafc() + if self.param['typegraph'] == 3 : + fileout = os.path.join(os.path.basename(self.fileout), 'index.html') + else : + fileout = os.path.basename(self.fileout) + self.list_graph.append([fileout, txt]) + print_liste(self.DictPathOut[self.itempath], self.list_graph) + if self.param['svg'] or self.param['typegraph'] == 2: + self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, self.fileout, URL=self.fileout)) + elif self.param['typegraph'] == 3 : + fileout = os.path.join(self.fileout,'index.html') + self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, fileout, URL=fileout)) + else : + self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(self.fileout, wx.BITMAP_TYPE_ANY), name=`len(self.list_graph) - 1`)) + self.listimg[-1].Bind(wx.EVT_RIGHT_DOWN, self.onrightclick) + self.sizer_3.Add( self.listimg[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.labels.append(wx.StaticText(self.panel_1,-1, txt)) + self.sizer_3.Add(self.labels[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.buts.append(wx.Button(self.panel_1, wx.ID_DELETE, name = `len(self.list_graph) - 1`)) + self.sizer_3.Add(self.buts[-1], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_3.Fit(self.panel_1) self.Layout() - + self.panel_1.Scroll(0,self.panel_1.GetScrollRange(wx.VERTICAL)) - +# elif self.param['typegraph'] == 2 : +# parametres = {'gexffile' : self.fileout, +# 'titre': 'Le titre', +# 'nodemin': self.param['txt_min'], +# 'nodemax': self.param['txt_max'], +# 'bargraphw' : 60*int(self.param['clnb']), +# } +# web = WebExport(self.ira, parametres) +# afcout = web.exportafc() +# dial = SimpleDialog(self.ira) +# dial.link.SetLabel(afcout) +# dial.link.SetURL(afcout) +# dial.Layout() +# dial.ShowModal() + class GraphPanel(wx.ScrolledWindow): def __init__(self, parent, dico, list_graph, txt = '', style = wx.TAB_TRAVERSAL): @@ -198,308 +312,278 @@ class GraphPanel(wx.ScrolledWindow): self.Dict = dico self.txt = txt self.parent = parent - self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) + self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "Arial")) self.labels = [] self.listimg = [] self.dirout = os.path.dirname(self.Dict['ira']) self.deb = wx.StaticText(self, -1, txt) for i in range(0,len(list_graph)): if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) : - self.listimg.append(wx.StaticBitmap(self, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) + filename, ext = os.path.splitext(list_graph[i][0]) + if ext == '.svg' : + self.listimg.append(hl.HyperLinkCtrl(self, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0]))) + else : + self.listimg.append(wx.StaticBitmap(self, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) self.labels.append(wx.StaticText(self, -1, list_graph[i][1])) - + self.Bind(wx.EVT_MOTION, self.onMouseMove) self.__set_properties() self.__do_layout() def __set_properties(self): - self.SetScrollRate(20, 20) + self.EnableScrolling(True,True) + self.SetScrollRate(20, 20) + self.SetFocus() + def __do_layout(self): self.sizer_1 = wx.BoxSizer(wx.VERTICAL) self.sizer_2 = wx.BoxSizer(wx.VERTICAL) self.sizer_3 = wx.BoxSizer(wx.HORIZONTAL) - self.sizer_1.Add(self.deb) + self.sizer_1.Add(self.deb) for i in range(0, len(self.listimg)): self.sizer_1.Add(self.listimg[i], 1, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_1.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_2.Add(self.sizer_1, 1, wx.EXPAND, 0) self.SetSizer(self.sizer_1) self.sizer_1.Fit(self) - + + def onMouseMove(self, event): + self.SetFocus() + + +def open_antiprofil(panel, AntiProfile, encoding, title = _(u"Antiprofiles").decode('utf8'), translation = False, lems=None) : + if not translation : + DictAnti = ReadProfileAsDico(AntiProfile, True, encoding) + else : + DictAnti = AntiProfile + panel.AntiProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition) + for i in range(0, panel.parametres['clnb']): + tabantiprofile = ProfListctrlPanel(panel.parent, panel, DictAnti[str(i + 1)], True, i + 1, translation = translation) + tabantiprofile.lems = lems + panel.AntiProfNB.AddPage(tabantiprofile, 'classe %s' % str(i + 1)) + panel.TabChdSim.AddPage(panel.AntiProfNB, title) + +def getlemgram(corpus, lem) : + if not lem[6] in corpus.lems : + return lem[5] + else : + return corpus.lems[lem[6]].gram + class OpenCHDS(): def __init__(self, parent, corpus, parametres, Alceste=False): - #sep = u'\n ' - sep=' ' - self.parent = parent - self.corpus = corpus - self.parametres = parametres - self.pathout = PathOut(parametres['ira']) - self.pathout.basefiles(ChdTxtPathOut) - DictPathOut = self.pathout - self.DictPathOut = DictPathOut - self.dictpathout = DictPathOut - self.parent = parent - - Profile = DictPathOut['PROFILE_OUT'] - AntiProfile = DictPathOut['ANTIPRO_OUT'] - if isinstance(self.corpus, Corpus) : - self.encoding = self.corpus.parametres['syscoding'] + #sep = u'\n ' + sep=' ' + self.parent = parent + self.corpus = corpus + self.parametres = parametres + self.pathout = PathOut(parametres['ira']) + self.pathout.basefiles(ChdTxtPathOut) + DictPathOut = self.pathout + self.DictPathOut = DictPathOut + self.dictpathout = DictPathOut + self.Alceste = Alceste + + Profile = DictPathOut['PROFILE_OUT'] + AntiProfile = DictPathOut['ANTIPRO_OUT'] + self.encoding = self.parametres['encoding'] + if isinstance(self.corpus, Corpus) : self.corpus.make_ucecl_from_R(self.pathout['uce']) - elif 'tableau' in dir(gparent) : - self.encoding = gparent.tableau.parametres['syscoding'] - - #AnalyseConf = ConfigParser() - #AnalyseConf.readfp(codecs.open(filename,'r', self.encoding)) - #AnalyseConf.read(filename) - #if 'analyse' in AnalyseConf.sections() : - # section = 'analyse' - #elif 'questionnaire' in AnalyseConf.sections() : - # section = 'questionnaire' - #elif 'chd_dist_quest' in AnalyseConf.sections() : - # section = 'chd_dist_quest' - #self.section = section - #clnb = AnalyseConf.get(section, 'clusternb') - #clnb = int(clnb) - clnb = parametres['clnb'] - dlg = progressbar(self, maxi = 4 + clnb) - self.clnb = clnb - corpname = self.corpus.parametres['corpus_name'] - print 'lecture des profils' - dlg.Update(2, u'lecture des profils') - - DictProfile = ReadProfileAsDico(self, Profile, Alceste, self.encoding) - self.DictProfile = DictProfile - print 'lecture des antiprofils' - DictAnti = ReadProfileAsDico(self, AntiProfile, Alceste, self.encoding) - - panel = wx.Panel(parent, -1) - sizer1 = wx.BoxSizer(wx.VERTICAL) - - panel.chd_toolbar = wx.ToolBar(panel, -1, wx.DefaultPosition, wx.DefaultSize, wx.TB_FLAT | wx.TB_NODIVIDER) - panel.chd_toolbar.SetToolBitmapSize(wx.Size(16, 16)) - - if isinstance(self.corpus, Corpus) : - panel.corpus = self.corpus - self.ID_sg = wx.NewId() - butsg = wx.Button(panel.chd_toolbar, self.ID_sg, u"Profils des segments répétés ") - panel.chd_toolbar.AddControl(butsg) - panel.chd_toolbar.AddSeparator() - self.ID_export = wx.NewId() - butexp = wx.Button(panel.chd_toolbar, self.ID_export, u"Exporter le corpus ") - panel.chd_toolbar.AddControl(butexp) - panel.chd_toolbar.AddSeparator() - self.ID_colored = wx.NewId() - butcol = wx.Button(panel.chd_toolbar, self.ID_colored, u"Corpus en couleur ") - panel.chd_toolbar.AddControl(butcol) - panel.chd_toolbar.AddSeparator() - self.ID_searchf = wx.NewId() - butsearchf = wx.Button(panel.chd_toolbar, self.ID_searchf, u"Outil de navigation ") - panel.chd_toolbar.AddControl(butsearchf) - panel.chd_toolbar.AddSeparator() - - self.ID_proftype =wx.NewId() - butpt = wx.Button(panel.chd_toolbar, self.ID_proftype, u"Profils des types ") - panel.chd_toolbar.AddControl(butpt) - panel.chd_toolbar.AddSeparator() - - self.ID_clusterstat =wx.NewId() - butclusterstat = wx.Button(panel.chd_toolbar, self.ID_clusterstat, u"Stat par classe ") - panel.chd_toolbar.AddControl(butclusterstat) - panel.chd_toolbar.AddSeparator() - - - self.ID_rapport = wx.NewId() - #rap_img = wx.Image(os.path.join(self.parent.images_path,'icone_rap_16.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() - #panel.chd_toolbar.AddLabelTool(self.ID_rapport, "rapport", rap_img, shortHelp=u"Produire le rapport", longHelp=u"Exporter un rapport en texte simple") - butrap = wx.Button(panel.chd_toolbar, self.ID_rapport, u"Rapport ") - panel.chd_toolbar.AddControl(butrap) - - panel.chd_toolbar.Realize() - sizer1.Add(panel.chd_toolbar,0, wx.EXPAND, 5) - - #self.TabChdSim = wx.aui.AuiNotebook(self.parent.nb, -1, wx.DefaultPosition) - notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT| wx.NO_BORDER - panel.TabChdSim = aui.AuiNotebook(panel, -1, wx.DefaultPosition) - panel.TabChdSim.SetAGWWindowStyleFlag(notebook_flags) - panel.TabChdSim.SetArtProvider(aui.ChromeTabArt()) - sizer1.Add(panel.TabChdSim,10, wx.EXPAND, 5) - panel.SetSizer(sizer1) - sizer1.Fit(panel) - - - if isinstance(self.corpus, Corpus) : - panel.TabChdSim.corpus = corpus - panel.TabChdSim.corpus.dictpathout = self.DictPathOut - panel.parametres = self.parametres - - self.notenb = self.parent.nb.GetPageCount() - if os.path.exists(DictPathOut['pre_rapport']): - #self.tabRap = wx.TextCtrl(self.TabChdSim, -1, "", style=wx.TE_MULTILINE | wx.TE_RICH2) - #self.tabRap.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) - with codecs.open(DictPathOut['pre_rapport'], 'r', self.encoding) as f : + corpname = self.corpus.parametres['corpus_name'] + else : + corpname = self.corpus.parametres['matrix_name'] + if os.path.exists(self.pathout['analyse.db']) : + self.corpus.read_tableau(self.pathout['analyse.db']) + + clnb = parametres['clnb'] + dlg = progressbar(self, maxi = 4 + clnb) + self.clnb = clnb + print 'lecture des profils' + dlg.Update(2, _(u"Reading profiles").decode('utf8')) + + DictProfile = ReadProfileAsDico(Profile, Alceste, self.encoding) + self.DictProfile = DictProfile + self.cluster_size = [] + clusternames = {} + for i in range(0, clnb) : + clusternames[i] = ' '.join([u'%i' % (i + 1), _(u'Cluster').decode('utf8'), u'%i' % (i + 1)]) + if os.path.exists(self.pathout['classes_names.txt']) : + with codecs.open(self.pathout['classes_names.txt'], 'r', self.parent.syscoding) as f : + clusternames_ = f.read() + clusternames_ = dict([[i, ' '.join([`i + 1`, line])] for i, line in enumerate(clusternames_.splitlines())]) + clusternames.update(clusternames_) + #print 'lecture des antiprofils' + #DictAnti = ReadProfileAsDico(self, AntiProfile, Alceste, self.encoding) + + panel = wx.Panel(parent, -1) + sizer1 = wx.BoxSizer(wx.VERTICAL) + + if os.path.exists(DictPathOut['pre_rapport']): + with codecs.open(DictPathOut['pre_rapport'], 'r', self.encoding) as f : txt = f.read() - #self.tabRap.write(txt) - #self.tabRap.ShowPosition(0) - self.debtext = txt - else : - self.debtext = '' - - if os.path.exists(self.DictPathOut['liste_graph_chd']) : - list_graph = read_list_file(self.DictPathOut['liste_graph_chd'], self.encoding) - CHD = GraphPanelDendro(panel.TabChdSim, DictPathOut, list_graph, txt = self.debtext) - panel.TabChdSim.AddPage(CHD,'CHD') - - panel.ProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition) - panel.ProfNB.SetArtProvider(aui.ChromeTabArt()) - #self.ProfNB.SetTabCtrlHeight(100) - #panel.AntiProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition) - if os.path.exists(DictPathOut['prof_seg']) : - prof_seg = ReadProfileAsDico(self, DictPathOut['prof_seg'], False, self.encoding) + self.debtext = txt + else : + self.debtext = '' +# panel.chd_toolbar = wx.ToolBar(panel, -1, wx.DefaultPosition, wx.DefaultSize, wx.TB_FLAT | wx.TB_NODIVIDER) +# panel.chd_toolbar.SetToolBitmapSize(wx.Size(16, 16)) + + if isinstance(self.corpus, Corpus) : + panel.corpus = self.corpus + else : + panel.tableau = self.corpus + #self.parent.tableau = panel.tableau + panel.dictpathout = self.DictPathOut + panel.pathout = self.DictPathOut + panel.parent = self.parent + panel.DictProfile = self.DictProfile + panel.cluster_size = self.cluster_size + panel.debtext = self.debtext + +# self.ID_rapport = wx.NewId() +# #rap_img = wx.Image(os.path.join(self.parent.images_path,'icone_rap_16.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() +# #panel.chd_toolbar.AddLabelTool(self.ID_rapport, "rapport", rap_img, shortHelp=u"Produire le rapport", longHelp=u"Exporter un rapport en texte simple") +# butrap = wx.Button(panel.chd_toolbar, self.ID_rapport, u"Rapport ") +# panel.chd_toolbar.AddControl(butrap) +# +# panel.chd_toolbar.Realize() +# sizer1.Add(panel.chd_toolbar,0, wx.EXPAND, 5) + + #self.TabChdSim = wx.aui.AuiNotebook(self.parent.nb, -1, wx.DefaultPosition) + notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT| wx.NO_BORDER + panel.TabChdSim = aui.AuiNotebook(panel, -1, wx.DefaultPosition) + #panel.TabChdSim = LB.LabelBook(panel, -1, agwStyle = INB_TOP|INB_SHOW_ONLY_TEXT|INB_FIT_LABELTEXT) + panel.TabChdSim.SetAGWWindowStyleFlag(notebook_flags) + panel.TabChdSim.SetArtProvider(aui.ChromeTabArt()) + sizer1.Add(panel.TabChdSim,10, wx.EXPAND, 5) + panel.SetSizer(sizer1) + sizer1.Fit(panel) + + + if isinstance(self.corpus, Corpus) : + panel.TabChdSim.corpus = corpus + panel.TabChdSim.corpus.dictpathout = self.DictPathOut + else : + panel.TabChdSim.tableau = corpus + panel.TabChdSim.tableau.dictpathout = self.DictPathOut + panel.parametres = self.parametres + self.panel = panel + + self.notenb = self.parent.nb.GetPageCount() + + + if os.path.exists(self.DictPathOut['liste_graph_chd']) : + list_graph = read_list_file(self.DictPathOut['liste_graph_chd'], self.encoding) + CHD = GraphPanelDendro(panel.TabChdSim, DictPathOut, list_graph, txt = self.debtext) + panel.TabChdSim.AddPage(CHD,'CHD') + + + #panel.ProfNB.SetArtProvider(aui.ChromeTabArt()) + #panel.ProfNB = LB.LabelBook(panel, -1, agwStyle = INB_LEFT|INB_SHOW_ONLY_TEXT|INB_FIT_LABELTEXT) + #panel.ProfNB = wx.Listbook(self.parent, -1, style = wx.BK_DEFAULT) + #panel.ProfNB = wx.Treebook(self.parent, -1, style = wx.BK_DEFAULT) + #self.ProfNB.SetTabCtrlHeight(100) + #panel.AntiProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition) + if os.path.exists(DictPathOut['prof_seg']) : + prof_seg = ReadProfileAsDico(DictPathOut['prof_seg'], False, self.encoding) self.prof_seg_nb = aui.AuiNotebook(panel, -1, wx.DefaultPosition) - for i in range(0, clnb): + + + panel.ProfNB = aui.AuiNotebook(panel, -1, wx.DefaultPosition) + notebook_flags |= aui.AUI_NB_WINDOWLIST_BUTTON + panel.ProfNB.SetAGWWindowStyleFlag(notebook_flags) + for i in range(0, clnb): + self.cluster_size.append(DictProfile[str(i + 1)][0][0:3]) + if isinstance(self.corpus, Corpus) : + DictProfile[str(i + 1)][1:] = [val[0:5] + [getlemgram(self.corpus, val)] + val[6:] for val in DictProfile[str(i + 1)][1:]] dlg.Update(3+i, 'Classe %i' %(i+1)) - ind = '/'.join(DictProfile[str(i + 1)][0][0:2]) - indpour = ' - '.join([ind, DictProfile[str(i + 1)][0][2]]) - print 'construction liste classe %i' % i - self.tabprofile = ProfListctrlPanel(self.parent, self, DictProfile[str(i + 1)], Alceste, i + 1) + ind = '/'.join(DictProfile[str(i + 1)][0][0:2]).strip() + indpour = '\n'.join([ind, DictProfile[str(i + 1)][0][2]]) + self.tabprofile = ProfListctrlPanel(self.parent, self.panel, DictProfile[str(i + 1)], Alceste, i + 1) #self.tabantiprofile = ProfListctrlPanel(self.parent, self, DictAnti[str(i + 1)], Alceste, i + 1) - panel.ProfNB.AddPage(self.tabprofile, 'classe %s %s(%s%%)' % (str(i + 1), sep, indpour)) + panel.ProfNB.AddPage(self.tabprofile, clusternames[i] + '\n%s%%' % indpour, True) + panel.ProfNB.SetPageTextColour(i, '#890909') + panel.ProfNB.SetRenamable(i, True) #panel.AntiProfNB.AddPage(self.tabantiprofile, 'classe %s' % str(i + 1)) if os.path.exists(DictPathOut['prof_seg']) : self.tab_prof_seg = ProfListctrlPanel(self.parent, self, prof_seg[str(i + 1)], False, i + 1) - self.prof_seg_nb.AddPage(self.tab_prof_seg, 'classe %i' % (i + 1)) - - if clnb > 2 : - self.TabAFC = aui.AuiNotebook(panel.TabChdSim, -1, wx.DefaultPosition) - - list_graph=read_list_file(DictPathOut['liste_graph_afc'], self.encoding) - self.tabAFCGraph = GraphPanelAfc(self.TabAFC, DictPathOut, list_graph, self.clnb, coding=self.encoding) - self.TabAFC.AddPage(self.tabAFCGraph, 'AFC') - - if os.path.exists(self.DictPathOut['afc_facteur']) : - dictrow, first = ReadList(self.DictPathOut['afc_facteur'], self.encoding) - self.TabAFC_facteur = ListForSpec(self.parent, parametres, dictrow, first) - #dictrow, first = ReadList(self.DictPathOut['afc_row'], self.encoding) - #self.TabAFC_ligne = ListForSpec(self.parent, self.parametres, dictrow, first) - #dictrow, first = ReadList(self.DictPathOut['afc_col'], self.encoding) - #self.TabAFC_colonne = ListForSpec(parent, self.parametres, dictrow, first) - self.TabAFC.AddPage(self.TabAFC_facteur, 'Facteurs') - #self.TabAFC.AddPage(self.TabAFC_colonne, u'Colonnes') - #self.TabAFC.AddPage(self.TabAFC_ligne, u'Lignes') - - sizer_3 = wx.BoxSizer(wx.VERTICAL) - self.parent.nb_panel_2 = wx.Panel(panel.TabChdSim, -1) - self.parent.button_simi = wx.Button(self.parent.nb_panel_2, -1, "Voyager") - self.parent.simi3dpanel = simi3d(self.parent.nb_panel_2, -1) - sizer_3.Add(self.parent.simi3dpanel, 1, wx.EXPAND, 0) - sizer_3.Add(self.parent.button_simi, 0, wx.ALIGN_CENTER_HORIZONTAL, 0) - self.parent.nb_panel_2.SetSizer(sizer_3) - self.TabAFC.AddPage(self.parent.nb_panel_2, "graph 3D") - self.parent.Bind(wx.EVT_BUTTON, self.onsimi, self.parent.button_simi) - - panel.TabChdSim.AddPage(panel.ProfNB, 'Profils') - #panel.TabChdSim.AddPage(panel.AntiProfNB, 'Antiprofils') - dlg.Update(4 + self.clnb, 'Affichage...') - if clnb > 2 : - panel.TabChdSim.AddPage(self.TabAFC, 'AFC') - if os.path.exists(DictPathOut['prof_seg']) : - panel.TabChdSim.AddPage(self.prof_seg_nb, u'Profils des segments répétés') - - if isinstance(self.corpus, Corpus) : - panel.Bind(wx.EVT_BUTTON, self.on_export_classes, id = self.ID_export) - panel.Bind(wx.EVT_BUTTON, self.onprofseg, id = self.ID_sg) - panel.Bind(wx.EVT_BUTTON, self.oncolored, id = self.ID_colored) - panel.Bind(wx.EVT_BUTTON, self.onsearchf, id = self.ID_searchf) - panel.Bind(wx.EVT_BUTTON, self.onproftype, id = self.ID_proftype) - panel.Bind(wx.EVT_BUTTON, self.onclusterstat, id = self.ID_clusterstat) - - panel.Bind(wx.EVT_BUTTON, self.ongetrapport, id = self.ID_rapport) - self.parent.nb.AddPage(panel, 'Classification - %s' % corpname) - self.parent.ShowTab(True) - self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1) - #for pane in self.parent._mgr.GetAllPanes() : - # if isinstance(pane.window, aui.AuiNotebook): - # nb = pane.window - # nb.SetAGWWindowStyleFlag(notebook_flags) - # nb.SetArtProvider(aui.ChromeTabArt()) - dlg.Destroy() - self.parent._mgr.Update() - + self.prof_seg_nb.AddPage(self.tab_prof_seg, _(u"Cluster").decode('utf8') + ' %i' % (i + 1)) + panel.ProfNB.SetSelection(0) + + if clnb > 2 : + self.TabAFC = aui.AuiNotebook(panel.TabChdSim, -1, wx.DefaultPosition) + log.info('read AFC') + list_graph=read_list_file(DictPathOut['liste_graph_afc'], self.encoding) + self.tabAFCGraph = GraphPanelAfc(self.TabAFC, DictPathOut, list_graph, self.clnb, coding=self.encoding) + self.TabAFC.AddPage(self.tabAFCGraph, _(u"CA").decode('utf8')) + + if os.path.exists(self.DictPathOut['afc_facteur']) : + dictrow, first = ReadList(self.DictPathOut['afc_facteur'], self.encoding) + self.TabAFC_facteur = ListForSpec(self.parent, parametres, dictrow, first[1:]) + #dictrow, first = ReadList(self.DictPathOut['afc_row'], self.encoding) + #self.TabAFC_ligne = ListForSpec(self.parent, self.parametres, dictrow, first) + #dictrow, first = ReadList(self.DictPathOut['afc_col'], self.encoding) + #self.TabAFC_colonne = ListForSpec(parent, self.parametres, dictrow, first) + self.TabAFC.AddPage(self.TabAFC_facteur, _(u"Factor").decode('utf8')) + #self.TabAFC.AddPage(self.TabAFC_colonne, u'Colonnes') + #self.TabAFC.AddPage(self.TabAFC_ligne, u'Lignes') + + sizer_3 = wx.BoxSizer(wx.VERTICAL) + self.parent.nb_panel_2 = wx.Panel(panel.TabChdSim, -1) + self.parent.button_simi = wx.Button(self.parent.nb_panel_2, -1, "Voyager") + self.parent.simi3dpanel = simi3d(self.parent.nb_panel_2, -1) + sizer_3.Add(self.parent.simi3dpanel, 1, wx.EXPAND, 0) + sizer_3.Add(self.parent.button_simi, 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.parent.nb_panel_2.SetSizer(sizer_3) + self.TabAFC.AddPage(self.parent.nb_panel_2, _(u"3D graph").decode('utf8')) + self.parent.Bind(wx.EVT_BUTTON, self.onsimi, self.parent.button_simi) + + panel.TabChdSim.AddPage(panel.ProfNB, _(u"Profiles").decode('utf8')) + #panel.TabChdSim.AddPage(panel.AntiProfNB, 'Antiprofils') + dlg.Update(4 + self.clnb, 'Affichage...') + if clnb > 2 : + panel.TabChdSim.AddPage(self.TabAFC, _(u"CA").decode('utf8')) + if os.path.exists(DictPathOut['prof_seg']) : + panel.TabChdSim.AddPage(self.prof_seg_nb, _(u"Repeated segments profiles").decode('utf8')) + +# panel.Bind(wx.EVT_BUTTON, self.ongetrapport, id = self.ID_rapport) + if os.path.exists(os.path.join(self.parametres['pathout'], 'tgenchi2.csv')) : + self.parametres['tgenspec'] = os.path.join(self.parametres['pathout'], 'tgenchi2.csv') + TgenLayout(panel) + + if os.path.exists(self.dictpathout['translations.txt']) : + with codecs.open(self.dictpathout['translations.txt'], 'r', 'utf8') as f: + translist = f.read() + translist = [line.split('\t') for line in translist.splitlines()] + for line in translist : + self.opentrans(line) + + panel.TabChdSim.SetSelection(0) + self.parent.nb.AddPage(panel, _(u"Clustering").decode('utf8') + ' - %s' % corpname) + self.parent.ShowTab(True) + self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1) + #for pane in self.parent._mgr.GetAllPanes() : + # if isinstance(pane.window, aui.AuiNotebook): + # nb = pane.window + # nb.SetAGWWindowStyleFlag(notebook_flags) + # nb.SetArtProvider(aui.ChromeTabArt()) + dlg.Destroy() + + + self.parent._mgr.Update() + + def opentrans(self, trans) : + prof = ReadProfileAsDico(self.dictpathout[trans[0]], False, 'utf8') + with codecs.open(self.dictpathout[trans[1]], 'r', 'utf8') as f : + lems = f.read() + lems = [line.split('\t') for line in lems.splitlines()] + lems = dict(lems) + open_antiprofil(self.panel, prof, 'utf8', title = trans[0], translation=True, lems=lems) + self.panel.lems = lems + self.panel.TabChdSim.SetSelection(self.panel.TabChdSim.GetPageCount() - 1) + def onsimi(self,event): outfile = print_simi3d(self) error = exec_rcode(self.parent.RPath, outfile, wait = True) - def ongetrapport(self, event) : - dial = PrefSimpleFile(self, self.parent, **{'mask' : '*.txt', 'title': 'Rapport'}) - dial.fbb.SetValue(self.DictPathOut['rapport']) - dial.CenterOnParent() - res = dial.ShowModal() - if res == wx.ID_OK : - fileout = dial.fbb.GetValue() - dial.Destroy() - with open(fileout, 'w') as f : - f.write(self.debtext + '\n' + GetTxtProfile(self.DictProfile)) - msg = u"Fini !" - dlg = wx.MessageDialog(self.parent, msg, u"Rapport", wx.OK | wx.NO_DEFAULT | wx.ICON_INFORMATION) - dlg.CenterOnParent() - dlg.ShowModal() - dlg.Destroy() - else : - dial.Destroy() - - def on_export_classes(self, event) : - corpus = self.parent.nb.GetPage(self.parent.nb.GetSelection()).corpus - dial = PrefExport(self, self.parent) - dial.fbb.SetValue(os.path.join(os.path.dirname(corpus.dictpathout['ira']), 'export_corpus.txt')) - dial.CenterOnParent() - res = dial.ShowModal() - if res == wx.ID_OK : - if dial.radio_type.GetSelection() == 0 : alc = True - else : alc = False - if dial.radio_lem.GetSelection() == 0 : lem = True - else : lem = False - self.corpus.export_corpus_classes(dial.fbb.GetValue(), alc = alc, lem = lem) - msg = u"Fini !" - dial.Destroy() - dlg = wx.MessageDialog(self.parent, msg, u"Export", wx.OK | wx.NO_DEFAULT | wx.ICON_INFORMATION) - dlg.CenterOnParent() - dlg.ShowModal() - dlg.Destroy() - - def onprofseg(self, event): - #try : - print 'plus de bug profseg' - print self.parametres - corpus = self.parent.nb.GetPage(self.parent.nb.GetSelection()).corpus - ProfileSegment(self.parent, self.dictpathout, self.parametres, corpus) - #except : - # BugReport(self.parent) - - def onproftype(self, event): - try : - corpus = self.parent.nb.GetPage(self.parent.nb.GetSelection()).corpus - ProfilType(self.parent, corpus) - except : - BugReport(self.parent) - - def oncolored(self,evt) : - dial = PrefSimpleFile(self, self.parent, **{'mask' : '*.html', 'title': 'Corpus en couleur'}) - dial.fbb.SetValue(os.path.join(os.path.dirname(self.corpus.dictpathout['ira']), 'corpus_couleur.html')) - dial.CenterOnParent() - res = dial.ShowModal() - if res == wx.ID_OK : - fileout = dial.fbb.GetValue() - dial.Destroy() - txt = self.corpus.make_colored_corpus() - with open(fileout, 'w') as f : - f.write(txt) - msg = u"Fini !\nVoulez-vous ouvrir le corpus dans votre navigateur ?" - dlg = wx.MessageDialog(self.parent, msg, u"Corpus en couleur", wx.NO | wx.YES | wx.NO_DEFAULT | wx.ICON_QUESTION) - dlg.CenterOnParent() - if dlg.ShowModal() == wx.ID_YES : - webbrowser.open(fileout) - dlg.Destroy() - def onclusterstat(self, evt) : dial = PrefSimpleFile(self, self.parent, **{'mask' : '*.csv', 'title': 'Stat par classe'}) dial.fbb.SetValue( os.path.join(os.path.dirname(self.corpus.dictpathout['ira']), 'stat_par_classe.csv')) @@ -508,25 +592,19 @@ class OpenCHDS(): if res == wx.ID_OK : fileout = dial.fbb.GetValue() dial.Destroy() - print fileout self.corpus.get_stat_by_cluster(fileout) msg = u"Fini !" - dlg = wx.MessageDialog(self.parent, msg, u"Stat par classe", wx.OK | wx.NO_DEFAULT | wx.ICON_INFORMATION) + dlg = wx.MessageDialog(self.parent, msg, _(u"Stat by cluster").decode('utf8'), wx.OK | wx.ICON_INFORMATION) dlg.CenterOnParent() if dlg.ShowModal() == wx.ID_OK : dlg.Destroy() - def onsearchf(self, evt) : - if 'FrameSearch' not in dir(self.parent) : - self.parent.FrameSearch = SearchFrame(self.parent, -1, u"Rechercher...", self.corpus) - self.parent.FrameSearch.Show() - - - -def PrintRapport(self, corpus, parametres, txt = True): - #if sys.platform == 'win32': - # sep = '\r\n' - #else: + #def onsearchf(self, evt) : + # if 'FrameSearch' not in dir(self.panel) : + # self.panel.FrameSearch = SearchFrame(self.parent, -1, u"Rechercher...", self.corpus) + # self.panel.FrameSearch.Show() + +def PrintRapport(self, corpus, parametres, istxt = True): sep = '\n' txt = """ +-+-+-+-+-+-+-+-+ @@ -535,44 +613,134 @@ def PrintRapport(self, corpus, parametres, txt = True): """ % datetime.datetime.now().ctime() - totocc = corpus.gettotocc() - if txt : - txt += u'nombre d\'uci: %i%s' % (corpus.getucinb(), sep) - txt += u'nombre d\'uce: %i%s' % (corpus.getucenb(), sep) - txt += u'nombre de formes: %i%s' % (len(corpus.formes), sep) - txt += u'nombre d\'occurrences: %i%s' % (totocc, sep) - txt += u'moyenne d\'occurrences par forme: %f%s' % (float(totocc) / float(len(self.corpus.formes)), sep) - txt += u'nombre de lemmes: %i%s' % (len(corpus.lems), sep) - txt += u'nombre de formes actives: %i%s' % (corpus.getactivesnb(1), sep) - txt += u'nombre de formes supplémentaires: %i%s' % (corpus.getactivesnb(2), sep) - txt += u'nombre de formes actives de fréquence >= %i: %i%s' % (parametres['eff_min_forme'], parametres['nbactives'], sep) - txt += u'moyenne d\'occurrences par uce :%f%s' % (float(totocc) / float(corpus.getucenb()), sep) + if istxt : + totocc = corpus.gettotocc() + txt += ': '.join([_(u'Number of texts').decode('utf8'), u'%i%s' % (corpus.getucinb(), sep)]) + txt += ': '.join([_(u'Number of text segments').decode('utf8'), '%i%s' % (corpus.getucenb(), sep)]) + txt += ': '.join([_(u'Number of forms').decode('utf8'), '%i%s' % (len(corpus.formes), sep)]) + txt += ': '.join([_(u'Number of occurrences').decode('utf8'), '%i%s' % (totocc, sep)]) + #txt += u'moyenne d\'occurrences par forme: %f%s' % (float(totocc) / float(len(self.corpus.formes)), sep) + txt += ': '.join([_(u'Number of lemmas').decode('utf8'), '%i%s' % (len(corpus.lems), sep)]) + txt += ': '.join([_(u'Number of active forms').decode('utf8'), '%i%s' % (corpus.getactivesnb(1), sep)]) + txt += ': '.join([_(u'Number of supplementary forms').decode('utf8'), '%i%s' % (corpus.getactivesnb(2), sep)]) + txt += ' >= '.join([_(u'Number of active forms with a frequency').decode('utf8'), '%i: %i%s' % (parametres['eff_min_forme'], parametres['nbactives'], sep)]) + txt += ': '.join([_(u'Mean of forms by segment').decode('utf8'), '%f%s' % (float(totocc) / float(corpus.getucenb()), sep)]) if 'tailleuc1' in parametres : - if parametres['classif_mode'] != 0 : - txt += u'taille uc1 : %i\n' % parametres['tailleuc1'] - else: - txt += u'taille uc1 / uc2: %i / %i - %i / %i%s' % (parametres['tailleuc1'], parametres['tailleuc2'], parametres['lenuc1'], parametres['lenuc2'], sep) - elif not txt : + if parametres['classif_mode'] == 0 : + txt += ': '.join([_(u'Size of rst1 / rst2').decode('utf8'), '%i / %i - %i / %i%s' % (parametres['tailleuc1'], parametres['tailleuc2'], parametres['lenuc1'], parametres['lenuc2'], sep)]) + else : self.Ucenb = self.nbind - txt += u'nombre d\'individus : %i%s' % (self.nbind, sep) - txt += u'nombre de classes : %i%s' % (self.clnb, sep) - if txt : - txt += u'nombre de classes : %i%s' % (parametres['clnb'], sep) + txt += ': '.join([_(u'Number of lines').decode('utf8'), '%i%s' % (self.nbind, sep)]) + txt += ': '.join([_(u'Number of clusters').decode('utf8'), '%i%s' % (self.clnb, sep)]) + if istxt : + txt += ': '.join([_(u'Number of clusters').decode('utf8'), '%i%s' % (parametres['clnb'], sep)]) if parametres['classif_mode'] == 0 or parametres['classif_mode'] == 1 : - txt += u'%i uce classées sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucenb(), (float(sum([len(cl) for cl in corpus.lc])) / float(corpus.getucenb())) * 100, sep) + txt += ' '.join(['%i' % sum([len(cl) for cl in corpus.lc]), _(u'segments classified on').decode('utf8'), '%i (%.2f%%)%s' % (corpus.getucenb(), (float(sum([len(cl) for cl in corpus.lc])) / float(corpus.getucenb())) * 100, sep)]) elif self.parametres['classif_mode'] == 2 : - txt += u'%i uci classées sur %i (%.2f%%)%s' % (sum([len(cl) for cl in corpus.lc]), corpus.getucinb(), (float(sum([len(cl) for cl in corpus.lc]))) / float(corpus.getucinb()) * 100, sep) - elif analyse == 'quest' : - txt += u'%i uce classées sur %i (%.2f%%)%s' % (self.ucecla, self.Ucenb, (float(self.ucecla) / float(self.Ucenb)) * 100, sep) - - txt += """ -########################### -temps d'analyse : %s -########################### -""" % parametres['time'] - file = open(self.pathout['pre_rapport'], 'w') - file.write(txt) - file.close() + txt += ' '.join([u'%i' % sum([len(cl) for cl in corpus.lc]), _(u'texts classified on').decode('utf8'), '%i (%.2f%%)%s' % (corpus.getucinb(), (float(sum([len(cl) for cl in corpus.lc]))) / float(corpus.getucinb()) * 100, sep)]) + else : + txt += ' '.join(['%i' % self.ucecla, _(u'line classified on').decode('utf8'), '%i (%.2f%%)%s' % (self.Ucenb, (float(self.ucecla) / float(self.Ucenb)) * 100, sep)]) + + txt += ''.join([sep, u'###########################', sep, _(u'time').decode('utf8'), ' : %s' % parametres.get('time', ''), sep, u'###########################', sep]) + + with open(self.pathout['pre_rapport'], 'w') as f : + f.write(txt) + + +class SashList(wx.Panel) : + def __init__(self, parent) : + wx.Panel.__init__(self, parent, -1) + self.parent=parent + winids = [] + #self.gparent=gparent + #self.dlist=dlist + #self.first = first + #self.menu = menu + # A window to the left of the client window + #self.listlex = listlex + self.leftwin1 = wx.SashLayoutWindow( + self, -1, wx.DefaultPosition, (200, 300), + wx.NO_BORDER|wx.SW_3D + ) + + self.leftwin1.SetDefaultSize((120, 1000)) + self.leftwin1.SetOrientation(wx.LAYOUT_VERTICAL) + self.leftwin1.SetAlignment(wx.LAYOUT_LEFT) + self.leftwin1.SetBackgroundColour(wx.Colour(0, 255, 0)) + self.leftwin1.SetSashVisible(wx.SASH_RIGHT, True) + self.leftwin1.SetExtraBorderSize(10) + + #textWindow = wx.TextCtrl( + # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize, + # wx.TE_MULTILINE|wx.SUNKEN_BORDER + # ) + + #textWindow.SetValue("A sub window") + + self.leftWindow1 = self.leftwin1 + winids.append(self.leftwin1.GetId()) + + rightwin1 = wx.SashLayoutWindow( + self, -1, wx.DefaultPosition, (200, 300), + wx.NO_BORDER|wx.SW_3D + ) + + rightwin1.SetDefaultSize((120, 1000)) + rightwin1.SetOrientation(wx.LAYOUT_VERTICAL) + rightwin1.SetAlignment(wx.LAYOUT_LEFT) + rightwin1.SetBackgroundColour(wx.Colour(0, 255, 0)) + rightwin1.SetSashVisible(wx.SASH_RIGHT, True) + rightwin1.SetExtraBorderSize(10) + #textWindow = wx.TextCtrl( + # leftwin1, -1, "", wx.DefaultPosition, wx.DefaultSize, + # wx.TE_MULTILINE|wx.SUNKEN_BORDER + # ) + + #textWindow.SetValue("A sub window") + + self.rightwin1 = rightwin1 + winids.append(rightwin1.GetId()) + +class TgenLayout : + def __init__(self, page): + self.page = page + parametres = self.page.parametres + ira = wx.GetApp().GetTopWindow() + tgenpath = os.path.join(parametres['pathout'], 'tgen.csv') + self.page.tgens, etoiles = ReadList(parametres['tgenspec'], ira.syscoding, sep="\t") + tgen = TGen(path = tgenpath, encoding = parametres['encoding']) + tgen.read() + tgenlempath = os.path.join(parametres['pathout'], 'tgenlemchi2.csv') + if os.path.exists(tgenlempath) : + self.page.parametres['tgenlemspec'] = tgenlempath + self.page.tgenlem, etoiles = ReadList(self.page.parametres['tgenlemspec'], ira.syscoding, sep="\t") + tgentab = False + gparent = None + if 'TabChdSim' in dir(page) : + page = page.TabChdSim + for i in range(page.GetPageCount()) : + tab = page.GetPage(i) + if 'gparent' in dir(tab) : + if tab.gparent is not None : + gparent = tab.gparent + if 'tgen' in dir(tab) : + if tab.tgen : + tgentab = tab + break + + if tgentab : + self.page.tgentab.RefreshData(self.page.tgens) + self.page.tgentab.tgens = tgen.tgen + self.page.tgentab.tgenlem = self.page.tgenlem + page.SetSelection(i) + else : + self.page.tgentab = ListForSpec(ira, gparent, self.page.tgens, etoiles[1:]) + self.page.tgentab.tgen = True + self.page.tgentab.tgens = tgen.tgen + if os.path.exists(tgenlempath) : + self.page.tgentab.tgenlem = self.page.tgenlem + page.AddPage(self.page.tgentab, _(u'Tgens Specificities').decode('utf8')) + page.SetSelection(page.GetPageCount() - 1) class dolexlayout : def __init__(self, ira, corpus, parametres): @@ -585,41 +753,57 @@ class dolexlayout : self.parametres = parametres self.DictSpec, first = ReadList(self.dictpathout['tablespecf'], self.corpus.parametres['syscoding']) + if os.path.exists(self.pathout['banalites.csv']) : + self.dictban, firstban = ReadList(self.pathout['banalites.csv'], self.corpus.parametres['syscoding']) self.DictType, firstt = ReadList(self.dictpathout['tablespect'], self.corpus.parametres['syscoding']) self.DictEff, firsteff = ReadList(self.dictpathout['tableafcm'], self.corpus.parametres['syscoding']) self.DictEffType, firstefft = ReadList(self.dictpathout['tabletypem'], self.corpus.parametres['syscoding']) - self.DictEffRelForme, firsteffrelf = ReadList(self.dictpathout['eff_relatif_forme'], self.corpus.parametres['syscoding']) - self.DictEffRelType, firsteffrelt = ReadList(self.dictpathout['eff_relatif_type'], self.corpus.parametres['syscoding']) - + self.DictEffRelForme, firsteffrelf = ReadList(self.dictpathout['eff_relatif_forme'], self.corpus.parametres['syscoding']) + self.DictEffRelType, firsteffrelt = ReadList(self.dictpathout['eff_relatif_type'], self.corpus.parametres['syscoding']) + self.etoiles = firsteff[1:] + #sash = SashList(ira.nb) + + self.TabStat = aui.AuiNotebook(ira.nb, -1, wx.DefaultPosition) self.TabStat.parametres = parametres - self.ListPan = ListForSpec(ira, self.parent, self.DictSpec, first) - self.ListPant = ListForSpec(ira, self.parent, self.DictType, firstt) - self.ListPanEff = ListForSpec(ira, self.parent, self.DictEff, firsteff) - self.ListPanEffType = ListForSpec(ira, self.parent, self.DictEffType, firstefft) - self.ListPanEffRelForme = ListForSpec(ira, self.parent, self.DictEffRelForme, firsteffrelf) - self.ListPanEffRelType = ListForSpec(ira, self.parent, self.DictEffRelType, firsteffrelt) - - self.TabStat.AddPage(self.ListPan, u'formes') - self.TabStat.AddPage(self.ListPant, u'Types') - self.TabStat.AddPage(self.ListPanEff, u'Effectifs formes') - self.TabStat.AddPage(self.ListPanEffType, u'Effectifs Type') - self.TabStat.AddPage(self.ListPanEffRelForme, u'Effectifs relatifs formes') - self.TabStat.AddPage(self.ListPanEffRelType, u'Effectifs relatifs Type') + self.ListPan = ListForSpec(ira, self, self.DictSpec, self.etoiles) + if os.path.exists(self.pathout['banalites.csv']) : + self.listban = ListForSpec(ira, self, self.dictban, ['eff'] + self.etoiles, usefirst = True) + #self.ListPan2 = ListForSpec(sash.rightwin1, self, self.DictSpec, first) + self.ListPant = ListForSpec(ira, self, self.DictType, self.etoiles) + self.ListPanEff = ListForSpec(ira, self, self.DictEff, self.etoiles) + self.ListPanEffType = ListForSpec(ira, self, self.DictEffType, self.etoiles) + self.ListPanEffRelForme = ListForSpec(ira, self, self.DictEffRelForme, self.etoiles) + self.ListPanEffRelType = ListForSpec(ira, self, self.DictEffRelType, self.etoiles) + + self.TabStat.AddPage(self.ListPan, _(u'Forms').decode('utf8')) + if os.path.exists(self.pathout['banalites.csv']) : + self.TabStat.AddPage(self.listban, _(u'Banal forms').decode('utf8')) + self.TabStat.AddPage(self.ListPant, _(u'POS').decode('utf8')) + self.TabStat.AddPage(self.ListPanEff, _(u'Forms frequencies').decode('utf8')) + self.TabStat.AddPage(self.ListPanEffType, _(u'POS frequencies').decode('utf8')) + self.TabStat.AddPage(self.ListPanEffRelForme, _(u'Forms relative frequencies').decode('utf8')) + self.TabStat.AddPage(self.ListPanEffRelType, _(u'POS relative frequencies').decode('utf8')) if self.parametres['clnb'] > 2 : - self.TabAFC = aui.AuiNotebook(self.TabStat, -1, wx.DefaultPosition) - list_graph=read_list_file(self.dictpathout['liste_graph_afcf'], encoding = self.encoding) - self.tabAFCGraph = GraphPanelAfc(self.TabAFC, self.dictpathout, list_graph, self.parametres['clnb'], itempath ='liste_graph_afcf', coding = self.encoding) - self.TabAFC.AddPage(self.tabAFCGraph, 'AFC formes') - list_graph=read_list_file(self.dictpathout['liste_graph_afct'], encoding = self.encoding) - self.tabAFCTGraph = GraphPanelAfc(self.TabAFC, self.dictpathout, list_graph, self.parametres['clnb'], itempath ='liste_graph_afct', coding=self.encoding) - self.TabAFC.AddPage(self.tabAFCTGraph, 'AFC type') - self.TabStat.AddPage(self.TabAFC, 'AFC') - - - ira.nb.AddPage(self.TabStat, u'Spécificités') - + self.TabAFC = aui.AuiNotebook(self.TabStat, -1, wx.DefaultPosition) + list_graph=read_list_file(self.dictpathout['liste_graph_afcf'], encoding = self.encoding) + self.tabAFCGraph = GraphPanelAfc(self.TabAFC, self.dictpathout, list_graph, self.parametres['clnb'], itempath ='liste_graph_afcf', coding = self.encoding) + self.TabAFC.AddPage(self.tabAFCGraph, _(u'CA forms').decode('utf8')) + list_graph=read_list_file(self.dictpathout['liste_graph_afct'], encoding = self.encoding) + self.tabAFCTGraph = GraphPanelAfc(self.TabAFC, self.dictpathout, list_graph, self.parametres['clnb'], itempath ='liste_graph_afct', coding=self.encoding) + self.TabAFC.AddPage(self.tabAFCTGraph, _(u'CA POS').decode('utf8')) + self.TabStat.AddPage(self.TabAFC, _(u'CA').decode('utf8')) + + ira.nb.AddPage(self.TabStat, ' - '.join([_(u'Specificities').decode('utf8'), self.parametres['name']])) + self.ira = ira + self.TabStat.corpus = self.corpus + self.TabStat.etoiles = self.etoiles + self.TabStat.pathout = self.pathout + if os.path.exists(os.path.join(self.parametres['pathout'], 'tgenspec.csv')) : + self.parametres['tgenspec'] = os.path.join(self.parametres['pathout'], 'tgenspec.csv') + TgenLayout(self.TabStat) + self.TabStat.SetSelection(0) ira.nb.SetSelection(self.parent.nb.GetPageCount() - 1) ira.ShowAPane("Tab_content") @@ -629,22 +813,31 @@ class StatLayout: self.corpus = corpus self.ira = ira self.read_result() + self.parametres = parametres self.TabStat = aui.AuiNotebook(ira.nb, -1, wx.DefaultPosition) self.TabStat.parametres = parametres + self.TabStat.corpus = corpus + self.TabStat.pathout = self.pathout # CHD = GraphPanel(panel.TabChdSim, DictPathOut, list_graph, txt = self.debtext) - # panel.TabChdSim.AddPage(CHD,'CHD') + # panel.TabChdSim.AddPage(CHD,'CHD') #self.TabStatTot = wx.TextCtrl(self.TabStat, -1, style=wx.NO_BORDER | wx.TE_MULTILINE | wx.TE_RICH2) list_graph = [['zipf.png', 'zipf']] self.TabStatTot = GraphPanel(ira.nb, self.pathout, list_graph, self.result['glob']) - #self.TabStatTot.write(self.result['glob']) - self.TabStat.AddPage(self.TabStatTot, 'global') + self.TabStat.AddPage(self.TabStatTot, _(u'Abstract').decode('utf8')) + + dictlabel = {'total' : _(u'Total').decode('utf8'), + u'formes_actives' : _(u'Actives forms').decode('utf8'), + u'formes_supplémentaires': _(u'Supplementary forms').decode('utf8'), + u'hapax' : _(u'Hapax').decode('utf8'), + } + for item in self.result: if item != 'glob': datam = [['forme', 'nb']] self.ListPan = ListPanel(ira, self, self.result[item]) - self.TabStat.AddPage(self.ListPan, item) - ira.nb.AddPage(self.TabStat, 'Stat') + self.TabStat.AddPage(self.ListPan, dictlabel[item]) + ira.nb.AddPage(self.TabStat, '%s' % parametres['name']) ira.nb.SetSelection(ira.nb.GetPageCount() - 1) ira.ShowAPane("Tab_content") @@ -652,7 +845,7 @@ class StatLayout: lcle = {'total' :u'total.csv', u'formes_actives':u'formes_actives.csv', u'formes_supplémentaires':u'formes_supplémentaires.csv', u'hapax': u'hapax.csv'} self.result = {} for key in lcle : - with open(self.pathout[lcle[key]], 'r') as f : + with codecs.open(self.pathout[lcle[key]], 'r', sys.getdefaultencoding()) as f : self.result[key] = [line.split(';') for line in f.read().splitlines()] self.result[key] = dict([[i,[line[0],int(line[1]), line[2]]] for i, line in enumerate(self.result[key])]) with open(self.pathout['glob.txt'], 'r') as f : @@ -666,21 +859,30 @@ class GraphPanelDendro(wx.Panel): self.dirout = os.path.dirname(self.dictpathout['ira']) self.list_graph = list_graph self.parent = self.GetParent()#parent - self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) + self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "Arial")) self.labels = [] self.listimg = [] self.tabchd = self.parent.GetParent() self.ira = self.tabchd.GetParent() self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL) + self.panel_1.SetBackgroundColour('white') self.deb = wx.StaticText(self.panel_1, -1, txt) dendro_img = wx.Image(os.path.join(self.ira.images_path,'but_dendro.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() + dendro_liste_img = wx.Image(os.path.join(self.ira.images_path,'but_dendro_liste.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() + dendro_cloud_img= wx.Image(os.path.join(self.ira.images_path,'but_dendro_cloud.png'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() self.butdendro = wx.BitmapButton(self, -1, dendro_img) - + self.butdendrotexte = wx.BitmapButton(self, -1, dendro_liste_img) + self.butdendrocloud = wx.BitmapButton(self, -1, dendro_cloud_img) + for i in range(0,len(list_graph)): if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) : - self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) + filename, ext = os.path.splitext(list_graph[i][0]) + if ext == '.svg' : + self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0]))) + else : + self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1])) - + self.__set_properties() self.__do_layout() @@ -688,41 +890,60 @@ class GraphPanelDendro(wx.Panel): self.panel_1.EnableScrolling(True,True) #self.panel_1.SetSize((1000,1000)) self.panel_1.SetScrollRate(20, 20) + self.panel_1.SetFocus() self.Bind(wx.EVT_BUTTON, self.ondendro, self.butdendro) + self.Bind(wx.EVT_BUTTON, self.ondendrotexte, self.butdendrotexte) + self.Bind(wx.EVT_BUTTON, self.ondendrocloud, self.butdendrocloud) self.param = {'width' : 700, 'height': 500, 'type_dendro': 0, 'color_nb': 0, 'taille_classe' : True, - 'type_tclasse' : 0 + 'type_tclasse' : 0, + 'svg' : 0 } self.type_dendro = [ u"phylogram", u"cladogram", u"fan", u"unrooted", u"radial" ] - def __do_layout(self): + def __do_layout(self): self.sizer_1 = wx.BoxSizer(wx.VERTICAL) self.sizer_2 = wx.BoxSizer(wx.HORIZONTAL) self.sizer_3 = wx.BoxSizer(wx.VERTICAL) self.sizer_3.Add(self.deb) - self.sizer_2.Add(self.butdendro, 0, 0, 0) + self.sizer_1.Add(self.butdendro, 0, 0, 0) + self.sizer_1.Add(self.butdendrotexte, 0, 0, 0) + self.sizer_1.Add(self.butdendrocloud, 0, 0, 0) + for i in range(0, len(self.listimg)): self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.panel_1.SetSizer(self.sizer_3) + self.sizer_2.Add(self.sizer_1, 0, wx.EXPAND, 0) self.sizer_2.Add(self.panel_1, 1, wx.EXPAND, 0) - self.SetSizer(self.sizer_2) + self.SetSizer(self.sizer_2) def make_param(self, dial): self.param['width'] = dial.m_spinCtrl2.GetValue() self.param['height'] = dial.m_spinCtrl1.GetValue() self.param['type_dendro'] = dial.m_choice1.GetSelection() - self.param['color_nb'] = dial.m_radioBox1.GetSelection() - self.param['taille_classe'] = dial.m_checkBox1.GetValue() - self.param['type_tclasse'] = dial.m_radioBox2.GetSelection() - - def make_dendro(self) : - while os.path.exists(os.path.join(self.dirout, 'dendrogamme_' + str(self.graphnb)+'.png')) : + self.param['svg'] = dial.choice_format.GetSelection() + if self.param['typedendro'] == 'classique' : + self.param['color_nb'] = dial.m_radioBox1.GetSelection() + self.param['taille_classe'] = dial.m_checkBox1.GetValue() + self.param['type_tclasse'] = dial.m_radioBox2.GetSelection() + if self.param.get('translation', False) : + if dial.trans.GetSelection() == 0 : + del self.param['translation'] + else : + self.param['translation'] = self.param['translation'][dial.trans.GetSelection()-1][1] + + def make_dendro(self, dendro = 'simple') : + if self.param['svg'] : + typefile = '.svg' + else : + typefile = '.png' + while os.path.exists(os.path.join(self.dirout, 'dendrogramme_' + str(self.graphnb)+typefile)) : self.graphnb += 1 - fileout = ffr(os.path.join(self.dirout,'dendrogamme_' + str(self.graphnb)+'.png')) + fileout = ffr(os.path.join(self.dirout,'dendrogramme_' + str(self.graphnb)+typefile)) width = self.param['width'] height = self.param['height'] type_dendro = self.type_dendro[self.param['type_dendro']] @@ -738,6 +959,10 @@ class GraphPanelDendro(wx.Panel): histo='FALSE' else : histo = 'TRUE' + if self.param['svg'] : + svg = 'TRUE' + else : + svg = 'FALSE' dendro_path = self.dictpathout['Rdendro'] classe_path = self.dictpathout['uce'] txt = """ @@ -746,18 +971,61 @@ class GraphPanelDendro(wx.Panel): source("%s") classes <- read.csv2("%s", row.names=1) classes <- classes[,1] - open_file_graph("%s", width=%i, height=%i) - plot.dendropr(tree.cut1$tree.cl, classes, type.dendro="%s", histo=%s, bw=%s, lab=NULL, tclasse=%s) - """ % (ffr(dendro_path), ffr(self.ira.RscriptsPath['Rgraph']), ffr(classe_path), ffr(fileout), width, height, type_dendro, histo, bw, tclasse) - + """ % (ffr(dendro_path), ffr(self.ira.RscriptsPath['Rgraph']), ffr(classe_path)) + if dendro == 'simple' : + txt += """ + open_file_graph("%s", width=%i, height=%i, svg=%s) + plot.dendropr(tree.cut1$tree.cl, classes, type.dendro="%s", histo=%s, bw=%s, lab=NULL, tclasse=%s) + """ % (ffr(fileout), width, height, svg, type_dendro, histo, bw, tclasse) + elif dendro == 'texte' : + txt += """ + load("%s") + source("%s") + if (is.null(debsup)) { + debsup <- debet + } + chistable <- chistabletot[1:(debsup-1),] + """ % (ffr(self.dictpathout['RData.RData']), ffr(self.ira.RscriptsPath['Rgraph'])) + if self.param.get('translation', False) : + txt += """ + rn <- read.csv2("%s", header=FALSE, sep='\t') + rnchis <- row.names(chistable) + commun <- intersect(rnchis, unique(rn[,2])) + idrnchis <- sapply(commun, function(x) {which(rnchis==x)}) + idrn <- sapply(commun, function(x) {which(as.vector(rn[,2])==x)[1]}) + rownames(chistable)[idrnchis] <- as.vector(rn[idrn,1]) + """ % ffr(self.param['translation']) + txt += """ + open_file_graph("%s", width=%i, height=%i, svg = %s) + plot.dendro.prof(tree.cut1$tree.cl, classes, chistable, nbbycl = 60, type.dendro="%s", bw=%s, lab=NULL) + """ % (ffr(fileout), width, height, svg, type_dendro, bw) + elif dendro == 'cloud' : + txt += """ + load("%s") + source("%s") + if (is.null(debsup)) { + debsup <- debet + } + chistable <- chistabletot[1:(debsup-1),] + open_file_graph("%s", width=%i, height=%i, svg=%s) + plot.dendro.cloud(tree.cut1$tree.cl, classes, chistable, nbbycl = 300, type.dendro="%s", bw=%s, lab=NULL) + """ % (ffr(self.dictpathout['RData.RData']), ffr(self.ira.RscriptsPath['Rgraph']), ffr(fileout), width, height, svg, type_dendro, bw) + + tmpfile = tempfile.mktemp() with open(tmpfile, 'w') as f : f.write(txt) - error = exec_rcode(self.ira.RPath, tmpfile, wait=True) + busy = wx.BusyInfo(_("Please wait...").decode('utf8'), self.parent) + wx.SafeYield() + error = exec_rcode(self.ira.RPath, tmpfile, wait=True) + del busy check_Rresult(self.ira, error) self.list_graph.append([fileout, 'Dendrogramme CHD1 - %s' % type_dendro]) print_liste(self.dictpathout['liste_graph_chd'], self.list_graph) - self.sizer_3.Add(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + if self.param['svg'] : + self.sizer_3.Add(hl.HyperLinkCtrl(self.panel_1, -1, fileout, URL=fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + else : + self.sizer_3.Add(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_3.Add(wx.StaticText(self.panel_1,-1, 'Dendrogramme CHD1 - %s' % type_dendro), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.sizer_3.Fit(self.panel_1) self.Layout() @@ -765,13 +1033,35 @@ class GraphPanelDendro(wx.Panel): def ondendro(self, evt): + self.param['typedendro'] = 'classique' dial = PrefDendro(self.ira, self.param) val = dial.ShowModal() if val == wx.ID_OK : self.make_param(dial) self.make_dendro() + def ondendrotexte(self, evt): + self.param['typedendro'] = 'texte' + if os.path.exists(self.dictpathout['translations.txt']) : + with codecs.open(self.dictpathout['translations.txt'], 'r', 'utf8') as f : + content = f.read() + print content + trans = [line.split('\t')[1] for line in content.splitlines()] + trans = [[val, self.dictpathout[val]] for val in trans] + self.param['translation'] = trans + dial = PrefDendro(self.ira, self.param) + val = dial.ShowModal() + if val == wx.ID_OK : + self.make_param(dial) + self.make_dendro(dendro = 'texte') + def ondendrocloud(self, evt): + self.param['typedendro'] = 'cloud' + dial = PrefDendro(self.ira, self.param) + val = dial.ShowModal() + if val == wx.ID_OK : + self.make_param(dial) + self.make_dendro(dendro = 'cloud') class OpenCorpus : def __init__(self, ira, parametres) : @@ -782,20 +1072,30 @@ class OpenCorpus : ira.nb.SetSelection(ira.nb.GetPageCount() - 1) ira.ShowAPane("Tab_content") +class MatLayout : + def __init__(self, ira, matrix): + #self.parent.content = self.csvtable + self.sheet = MySheet(ira.nb) + ira.nb.AddPage(self.sheet, matrix.parametres['matrix_name']) + self.sheet.Populate(matrix.csvtable) + self.sheet.parametres = matrix.parametres + ira.nb.SetSelection(ira.nb.GetPageCount() - 1) + ira.ShowAPane("Tab_content") + class CopusPanel(wx.Panel) : def __init__(self, parent, parametres) : wx.Panel.__init__ ( self, parent, id = wx.ID_ANY, pos = wx.DefaultPosition, size = wx.Size( 500,300 ), style = wx.TAB_TRAVERSAL ) self.parametres = parametres fgSizer5 = wx.FlexGridSizer( 0, 2, 0, 0 ) fgSizer5.SetFlexibleDirection( wx.BOTH ) - fgSizer5.SetNonFlexibleGrowMode( wx.FLEX_GROWMODE_SPECIFIED ) + fgSizer5.SetNonFlexibleGrowMode( wx.FLEX_GROWMODE_SPECIFIED ) self.fgSizer5 = fgSizer5 - - self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, u"Description du corpus", wx.DefaultPosition, wx.DefaultSize, 0 ) + + self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, _(u"Description of corpus").decode('utf8'), wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText18.Wrap( -1 ) fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 ) - + self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText19.Wrap( -1 ) fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 ) @@ -803,13 +1103,18 @@ class CopusPanel(wx.Panel) : self.m_staticText20 = wx.StaticText( self, wx.ID_ANY, u"Nom", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText20.Wrap( -1 ) fgSizer5.Add( self.m_staticText20, 0, wx.ALL, 5 ) - + self.m_staticText21 = wx.StaticText( self, wx.ID_ANY, parametres['corpus_name'], wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText21.Wrap( -1 ) fgSizer5.Add( self.m_staticText21, 0, wx.ALL, 5 ) - description = {'lang' : u'langue', - 'encoding' : u'encodage'} + description = {'lang' : _(u'Language').decode('utf8'), + 'encoding' : _(u'Characters set').decode('utf8'), + 'ucinb' : _(u'Number of texts').decode('utf8'), + 'ucenb' : _(u'Number of text segments').decode('utf8'), + 'formesnb' : _(u'Number of forms').decode('utf8'), + 'hapax' : _(u'Number of hapax').decode('utf8'), + } keys = ['lang', 'encoding', 'originalpath', 'pathout', 'date', 'time'] @@ -818,7 +1123,7 @@ class CopusPanel(wx.Panel) : self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, u"Paramètres", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText18.Wrap( -1 ) fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 ) - + self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText19.Wrap( -1 ) fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 ) @@ -829,7 +1134,7 @@ class CopusPanel(wx.Panel) : self.m_staticText18 = wx.StaticText( self, wx.ID_ANY, u"Statistiques", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText18.Wrap( -1 ) fgSizer5.Add( self.m_staticText18, 0, wx.ALL, 5 ) - + self.m_staticText19 = wx.StaticText( self, wx.ID_ANY, u"", wx.DefaultPosition, wx.DefaultSize, 0 ) self.m_staticText19.Wrap( -1 ) fgSizer5.Add( self.m_staticText19, 0, wx.ALL, 5 ) @@ -842,7 +1147,7 @@ class CopusPanel(wx.Panel) : def addkeys(self, keys, description) : for key in keys : - option = self.parametres.get(key,u'non défnini') + option = self.parametres.get(key,u'non défini') if isinstance(option, int) : option = `option` text = wx.StaticText( self, wx.ID_ANY, description.get(key, key), wx.DefaultPosition, wx.DefaultSize, 0 ) @@ -853,85 +1158,83 @@ class CopusPanel(wx.Panel) : text.Wrap( -1 ) self.fgSizer5.Add( text, 0, wx.ALL, 5 ) -class GraphPanelSimi(wx.Panel): - def __init__(self, parent, dico, list_graph): - wx.Panel.__init__(self,parent) - self.afcnb = 1 - self.Dict = dico - self.dirout = os.path.dirname(self.Dict['ira']) - self.parent = self.GetParent()#parent - self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) - self.labels = [] - self.listimg = [] - self.tabsimi = self.parent.GetParent() - self.ira = self.tabsimi.GetParent() - self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL) - afc_img = wx.Image(os.path.join(self.ira.images_path,'button_simi.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() - self.butafc = wx.BitmapButton(self, -1, afc_img) - export_img = wx.Image(os.path.join(self.ira.images_path,'button_export.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() - self.butexport = wx.BitmapButton(self, -1, export_img) - - for i in range(0,len(list_graph)): - if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) and list_graph[i][0] != '' : - self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) - self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1])) - - self.__set_properties() - self.__do_layout() - - def __set_properties(self): - self.panel_1.EnableScrolling(True,True) - #self.panel_1.SetSize((1000,1000)) - self.panel_1.SetScrollRate(20, 20) - - def __do_layout(self): - self.sizer_1 = wx.BoxSizer(wx.HORIZONTAL) - self.sizer_2 = wx.BoxSizer(wx.VERTICAL) - self.sizer_3 = wx.BoxSizer(wx.VERTICAL) - self.sizer_2.Add(self.butafc, 0, 0, 0) - self.sizer_2.Add(self.butexport, 0, 0, 0) - for i in range(0, len(self.listimg)): - self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) - self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) - self.panel_1.SetSizer(self.sizer_3) - self.sizer_1.Add(self.sizer_2, 0, wx.EXPAND, 0) - self.sizer_1.Add(self.panel_1, 1, wx.EXPAND, 0) - self.SetSizer(self.sizer_1) - class DefaultTextLayout : - def __init__(self, ira, corpus, parametres) : + def __init__(self, ira, corpus, parametres, cmd = False) : self.pathout = PathOut(dirout = parametres['pathout']) self.ira = ira self.parent = ira self.parametres = parametres self.corpus = corpus + self.cmd = cmd self.dolayout() - - def dolayout(self) : + + def dolayout(self, cmd) : log.info('no layout yet') class WordCloudLayout(DefaultTextLayout): def dolayout(self): - #self.dictpathout = parent.corpus.dictpathout - #self.pathout = os.path.dirname(filename) - #self.corpus = parent.corpus - # self.read_result() self.pathout.basefiles(simipath) self.Tab = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition) -# if os.path.exists(self.pathout['liste_graph']) : -# list_graph = read_list_file(self.pathout['liste_graph']) -# else : -# list_graph = [['','']] - list_graph = [['nuage_1.png', 'Nuage']] + if self.parametres['svg'] : + list_graph = [['nuage_1.svg', 'Nuage']] + else : + list_graph = [['nuage_1.png', 'Nuage']] self.TabStatTot = GraphPanel(self.ira.nb, self.pathout, list_graph) - #self.TabStatTot.write(self.result['glob']) self.Tab.AddPage(self.TabStatTot, 'Nuage') self.Tab.corpus = self.corpus self.Tab.parametres = self.parametres - self.ira.nb.AddPage(self.Tab, 'WordCloud %s' % self.parametres.get('corpus_name','corpus_name')) + self.ira.nb.AddPage(self.Tab, '%s' % self.parametres['name']) self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) self.ira.ShowAPane("Tab_content") +class LabbeLayout(DefaultTextLayout): + def dolayout(self): + self.Tab = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition) + #if self.parametres['svg'] : + # list_graph = [['nuage_1.svg', 'Nuage']] + #else : + # list_graph = [['nuage_1.png', 'Nuage']] + list_graph = [['labbe-tree.png', _(u'Ward clustering (method ward2)').decode('utf8')], + ['labbe-heatmap.png', _(u'Heatmap').decode('utf8')], + ['labbe-matrix.png', _(u'Matrix').decode('utf8')]] + for val in list_graph : + #self.TabStatTot = GraphPanel(self.ira.nb, self.pathout, [val]) + self.Tab.AddPage(GraphPanel(self.Tab, self.pathout, [val]), val[1]) + self.Tab.corpus = self.corpus + self.Tab.parametres = self.parametres + self.ira.nb.AddPage(self.Tab, u'%s' % self.parametres['name']) + self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) + self.ira.ShowAPane("Tab_content") + +def blender(self): + nodesfile = self.pathout['nodes.csv'] + edgesfile = self.pathout['edges.csv'] + jsonout = self.pathout.makenew('graphe_json', 'json') + txt = """ + library(igraph) + load("%s") + source("%s") + """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['Rgraph'])) + txt += """ + nodesf <- "%s" + edgesf <- "%s" + """ % (ffr(nodesfile), ffr(edgesfile)) + txt += """ + if ("communities" %in% names(graph.simi)) { + community = TRUE + } else { + community = FALSE + } + graph.to.file(graph.simi, nodesfile = nodesf, edgesfile = edgesf, community = community) + """ + filetmp = tempfile.mktemp() + with open(filetmp, 'w') as f : + f.write(txt) + exec_rcode(self.ira.RPath, filetmp) + GraphToJson(nodesfile, edgesfile, jsonout) + launchcommand(['/home/pierre/prog/blender-2.73-linux-glibc211-x86_64/blender', '-P', os.path.join(self.ira.AppliPath, 'network_to_blender.py'), jsonout]) + + class SimiLayout(DefaultTextLayout) : def dolayout(self) : self.pathout.basefiles(simipath) @@ -939,62 +1242,426 @@ class SimiLayout(DefaultTextLayout) : self.indices = indices_simi if os.path.exists(self.pathout['liste_graph']) : list_graph = read_list_file(self.pathout['liste_graph']) - else : + else : + list_graph = [['','']] + if not self.cmd : + notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT + self.tabsimi = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition) + self.tabsimi.SetAGWWindowStyleFlag(notebook_flags) + self.tabsimi.SetArtProvider(aui.ChromeTabArt()) + self.tabsimi.corpus = self.corpus + self.tabsimi.parametres = self.parametres + self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph) + self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc) + self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport) + self.graphpan.Bind(wx.EVT_BUTTON, self.blender, self.graphpan.butblender) + self.tabsimi.AddPage(self.graphpan, 'Graph') + self.ira.nb.AddPage(self.tabsimi, _(u'Graph analysis').decode('utf8')) + self.ira.ShowTab(True) + self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) + + def redosimi(self, evt) : + redosimi(self, evt) +# with open(self.pathout['selected.csv'],'r') as f : +# selected = f.read() +# selected = [int(val) for val in selected.splitlines()] +# if self.actives is None : +# with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f : +# self.actives = f.read() +# self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()] +# if os.path.exists(self.pathout['actives_nb.csv']) : +# with open(self.pathout['actives_nb.csv'], 'r') as f : +# act_nb = f.read() +# act_nb = act_nb.splitlines() +# dictcol = dict([[i, [self.actives[i], int(act_nb[i])]] for i, val in enumerate(self.actives)]) +# else : +# dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)]) +# #res = SelectColumn(self.ira, dictcol, self.actives, self.pathout['selected.csv'], selected = selected, dlg = True) +# #if res.ok : +# prep = PrepSimi(self.ira, self, self.parametres,self.pathout['selected.csv'], self.actives, indices_simi, wordlist = dictcol, selected = selected) +# if prep.val == wx.ID_OK : +# self.parametres = prep.parametres +# +# script = PrintSimiScript(self) +# script.make_script() +# pid = exec_rcode(self.ira.RPath, script.scriptout, wait = True) +# check_Rresult(self.ira, pid) +# if self.parametres['type_graph'] in [1,3] : +# if self.parametres['svg'] : +# filename, ext = os.path.splitext(script.filename) +# fileout = filename + '.svg' +# elif self.parametres['type_graph'] == 3 : +# fileout = script.filename +# parametres = {'gexffile' : fileout, +# 'dirout' : os.path.dirname(fileout), +# 'titre': 'Le titre', +# #'nodemin': self.param['txt_min'], +# #'nodemax': self.param['txt_max'], +# #'bargraphw' : 60*int(self.param['clnb']), +# } +# web = WebExport(self.ira, parametres) +# fileout = web.exportsimi() +# else : +# fileout = script.filename +# if os.path.exists(self.pathout['liste_graph']): +# graph_simi = read_list_file(self.pathout['liste_graph']) +# graph_simi.append([os.path.basename(fileout), script.txtgraph]) +# else : +# graph_simi = [[os.path.basename(fileout), script.txtgraph]] +# print_liste(self.pathout['liste_graph'], graph_simi) +# DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira']) +# if self.parametres['type_graph'] in [1,3] : +# if self.parametres['svg'] or self.parametres['type_graph'] == 3 : +# self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) +# else : +# self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) +# self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) +# self.graphpan.sizer_3.Fit(self.graphpan.panel_1) +# self.graphpan.Layout() +# self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL)) + + def export(self, evt) : + nb = 1 + while os.path.exists(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')): + nb +=1 + fileout = ffr(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')) + txt = """ + library(igraph) + load("%s") + source("%s") + fileout <- "%s" + graph <- graph.simi$graph + V(graph)$x <- graph.simi$layout[,1] + V(graph)$y <- graph.simi$layout[,2] + if (length(graph.simi$label.cex == 1)) { + V(graph)$weight <- graph.simi$eff + } else { + V(graph)$weight <- graph.simi$label.cex + } + V(graph)$rcolor <- vertex.label.color + V(graph)$frequences <- graph.simi$mat.eff + V(graph)$label <- as.character(graph.simi$v.label) + E(graph)$weight <- graph.simi$we.width + write.graph(graph, fileout, format = 'graphml') + #saveAsGEXF(graph, filepath = fileout) + """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['simi']), fileout) + filetmp = tempfile.mktemp() + with open(filetmp, 'w') as f : + f.write(txt) + exec_rcode(self.ira.RPath, filetmp) + mss = wx.MessageDialog(self.ira, fileout, _(u'File exported').decode('utf8'), wx.OK) + mss.CenterOnParent() + mss.ShowModal() + mss.Destroy() + + def blender(self, evt): + blender(self) + + +class DefaultMatLayout : + def __init__(self, parent, tableau, parametres) : + self.pathout = PathOut(dirout = parametres['pathout']) + self.ira = parent + self.parent = parent + self.tableau = tableau + self.parametres = parametres + if os.path.exists(self.pathout['analyse.db']) : + self.tableau.read_tableau(self.pathout['analyse.db']) + self.dolayout() + self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) + self.ira.ShowAPane("Tab_content") + + def dolayout(self) : + pass + +class FreqLayout(DefaultMatLayout) : + def dolayout(self) : + self.tab = wx.html.HtmlWindow(self.ira.nb, -1) + #self.tab = wx.html2.WebView.New(self) + res = normpath_win32(self.pathout['resultats.html']).replace('\\','/') + self.tab.LoadPage(res) + #self.tab.LoadURL(res) + self.tab.parametres = self.parametres + self.ira.nb.AddPage(self.tab, ' - '.join([_(u"Frequency").decode('utf8'), self.parametres['name']])) + + +class Chi2Layout(DefaultMatLayout) : + def dolayout(self): + self.tab = wx.html.HtmlWindow(self.ira.nb, -1) + if "gtk2" in wx.PlatformInfo: + self.tab.SetStandardFonts() + res = normpath_win32(self.pathout['resultats-chi2.html']).replace('\\','/') + self.tab.LoadPage(res) + self.tab.parametres = self.parametres + self.ira.nb.AddPage(self.tab, ' - '.join([u"Chi2", self.parametres['name']])) + #self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) + #self.ira.ShowAPane("Tab_content") + + +class ProtoLayout(DefaultMatLayout) : + def dolayout(self) : + list_graph = [['proto.png', _(u'Prototypical analysis').decode('utf8')]] + #self.Tab = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition) + #if self.parametres['svg'] : + # list_graph = [['nuage_1.svg', 'Nuage']] + #else : + # list_graph = [['nuage_1.png', 'Nuage']] + self.TabProto = GraphPanel(self.ira.nb, self.pathout, list_graph) + #self.Tab.AddPage(self.TabProto, 'Analyse Prototypique') + #self.Tab.corpus = self.corpus + self.TabProto.parametres = self.parametres + self.ira.nb.AddPage(self.TabProto, ' - '.join([_(u'Prototypical analysis').decode('utf8'), self.parametres['name']])) + #self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) + #self.ira.ShowAPane("Tab_content") + + +class SimiMatLayout(DefaultMatLayout) : + def dolayout(self): + self.pathout.basefiles(simipath) + self.indices = indices_simi + if os.path.exists(self.pathout['liste_graph']) : + list_graph = read_list_file(self.pathout['liste_graph']) + else : list_graph = [['','']] notebook_flags = aui.AUI_NB_DEFAULT_STYLE | aui.AUI_NB_TAB_EXTERNAL_MOVE | aui.AUI_NB_TAB_MOVE | aui.AUI_NB_TAB_FLOAT - self.tabsimi = aui.AuiNotebook(self.ira.nb, -1, wx.DefaultPosition) + self.tabsimi = aui.AuiNotebook(self.parent.nb, -1, wx.DefaultPosition) self.tabsimi.SetAGWWindowStyleFlag(notebook_flags) self.tabsimi.SetArtProvider(aui.ChromeTabArt()) - self.tabsimi.corpus = self.corpus - self.tabsimi.parametres = self.parametres self.graphpan = GraphPanelSimi(self.tabsimi, self.pathout, list_graph) self.graphpan.Bind(wx.EVT_BUTTON, self.redosimi, self.graphpan.butafc) self.graphpan.Bind(wx.EVT_BUTTON, self.export, self.graphpan.butexport) + self.graphpan.Bind(wx.EVT_BUTTON, self.blender, self.graphpan.butblender) self.tabsimi.AddPage(self.graphpan, 'Graph') - self.ira.nb.AddPage(self.tabsimi, 'Analyse de graph') - self.ira.ShowTab(True) - self.ira.nb.SetSelection(self.ira.nb.GetPageCount() - 1) - - def redosimi(self, evt) : + self.tabsimi.parametres = self.parametres + self.parent.nb.AddPage(self.tabsimi, ' - '.join([_(u'Graph analysis').decode('utf8'), self.parametres['name']])) + #self.parent.ShowTab(True) + #self.parent.nb.SetSelection(self.parent.nb.GetPageCount() - 1) + + def redosimi(self,evt) : with open(self.pathout['selected.csv'],'r') as f : selected = f.read() selected = [int(val) for val in selected.splitlines()] - if self.actives is None : - with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f : - self.actives = f.read() - self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()] - dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)]) - #res = SelectColumn(self.ira, dictcol, self.actives, self.pathout['selected.csv'], selected = selected, dlg = True) - #if res.ok : - prep = PrepSimi(self.ira, self, self.parametres,self.pathout['selected.csv'], self.actives, indices_simi, wordlist = dictcol, selected = selected) - if prep.val == wx.ID_OK : - self.parametres = prep.parametres - - script = PrintSimiScript(self) - script.make_script() - pid = exec_rcode(self.ira.RPath, script.scriptout, wait = True) - check_Rresult(self.ira, pid) + #if self.actives is None : + # with codecs.open(self.pathout['actives.csv'], 'r', self.parametres['encoding']) as f : + # self.actives = f.read() + # self.actives = self.actives.splitlines()#[act for act in self.actives.splitlines()] + try : + actives = [[val, self.tableau.actives[val][0]] for val in self.tableau.actives] + except : + actives = [[val, self.tableau.actives[val]] for val in self.tableau.actives] + + #self.tableau.make_listactives() + actives = dict([[i, val] for i, val in enumerate(actives)]) + #dictcol = dict([[i, [act, self.corpus.getlemeff(act)]] for i, act in enumerate(self.actives)]) + self.dial = PrefSimi(self.parent, -1, self.parametres, self.indices, wordlist = actives, selected = selected, actives = self.tableau.listactives) + self.dial.CenterOnParent() + self.val = self.dial.ShowModal() + if self.val == wx.ID_OK : + last = self.dial.listcol.GetFirstSelected() + lastl = [self.dial.listcol.GetFirstSelected()] + indexes = [self.dial.listcol.getColumnText(self.dial.listcol.GetFirstSelected(),0)] + while self.dial.listcol.GetNextSelected(last) != -1: + last = self.dial.listcol.GetNextSelected(last) + lastl.append(last) + indexes.append(self.dial.listcol.getColumnText(last,0)) + self.column = [self.tableau.listactives.index(val) for val in indexes] + self.column.sort() + with open(self.pathout['selected.csv'], 'w') as f : + f.write('\n'.join([`val` for val in self.column])) + self.make_param() + self.dial.Destroy() + self.script = PrintSimiScript(self) + self.script.make_script() + self.tmpfile = self.script.scriptout + dlg = progressbar(self, maxi = 2) + self.DoR(dlg) + dlg.Destroy() if self.parametres['type_graph'] == 1: + if self.parametres['svg'] : + filename, ext = os.path.splitext(self.script.filename) + fileout = filename + '.svg' + else : + fileout = self.script.filename + fileout = normpath_win32(fileout) if os.path.exists(self.pathout['liste_graph']): graph_simi = read_list_file(self.pathout['liste_graph']) - graph_simi.append([os.path.basename(script.filename), script.txtgraph]) + graph_simi.append([os.path.basename(fileout), self.script.txtgraph]) else : - graph_simi = [[os.path.basename(script.filename), script.txtgraph]] + graph_simi = [[os.path.basename(fileout), self.script.txtgraph]] print_liste(self.pathout['liste_graph'], graph_simi) DoConf().makeoptions([self.parametres['type']], [self.parametres], self.pathout['Analyse.ira']) if self.parametres['type_graph'] == 1: - self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(script.filename, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) - self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + if self.parametres['svg'] : + self.graphpan.sizer_3.Add(hl.HyperLinkCtrl(self.graphpan.panel_1, -1, fileout, URL = fileout), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + else : + self.graphpan.sizer_3.Add(wx.StaticBitmap(self.graphpan.panel_1, -1, wx.Bitmap(fileout, wx.BITMAP_TYPE_ANY)), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.graphpan.sizer_3.Add(wx.StaticText(self.graphpan.panel_1,-1, self.script.txtgraph), 0, wx.ALIGN_CENTER_HORIZONTAL, 0) self.graphpan.sizer_3.Fit(self.graphpan.panel_1) self.graphpan.Layout() self.graphpan.panel_1.Scroll(0,self.graphpan.panel_1.GetScrollRange(wx.VERTICAL)) + else : + self.dial.Destroy() + + + def make_param(self) : + if self.parametres['first'] : + keep_coord = False + else : + keep_coord = self.dial.check_coord.GetValue() + #self.select = self.dial.check_colch.GetValue() + + paramsimi = {'coeff' : self.dial.choice1.GetSelection(), + 'layout' : self.dial.choice2.GetSelection(), + 'type_graph' : self.dial.choice3.GetSelection(), + 'arbremax' : self.dial.check1.GetValue(), + 'coeff_tv' : self.dial.check_s_size.GetValue(), + 'coeff_tv_nb' : self.dial.spin_tv.GetValue(), + 'tvprop' : self.dial.check2.GetValue(), + 'tvmin' : self.dial.spin_tvmin.GetValue(), + 'tvmax' : self.dial.spin_tvmax.GetValue(), + 'coeff_te' : self.dial.check3.GetValue(), + 'coeff_temin' : self.dial.spin_temin.GetValue(), + 'coeff_temax' : self.dial.spin_temax.GetValue(), + 'label_e' : self.dial.check_elab.GetValue(), + 'label_v' : self.dial.check_vlab.GetValue(), + 'vcex' : self.dial.check_vcex.GetValue(), + 'vcexmin' : self.dial.spin_vcexmin.GetValue(), + 'vcexmax' : self.dial.spin_vcexmax.GetValue(), + 'cex' : self.dial.spin_cex.GetValue(), + 'seuil_ok' : self.dial.check_seuil.GetValue(), + 'seuil' : self.dial.spin_seuil.GetValue(), + 'cols' : self.dial.cols.GetColour(), + 'cola' : self.dial.cola.GetColour(), + 'width' : self.dial.spin_width.GetValue(), + 'height' : self.dial.spin_height.GetValue(), + 'first' : False, + 'keep_coord' : keep_coord, + 'alpha' : self.dial.slider_sphere.GetValue(), + 'film' : self.dial.film.GetValue(), + 'svg' : self.dial.choix_format.GetSelection(), + 'halo' : self.dial.halo.GetValue(), + 'com' : self.dial.comcheck.GetValue(), + 'communities' : self.dial.choix_com.GetSelection(), + 'edgecurved' : self.dial.check_curved.GetValue(), + } + if 'cexfromchi' in self.parametres : + paramsimi['cexfromchi'] = self.dial.checkit.GetValue() + if 'sfromchi' in self.parametres : + paramsimi['sfromchi'] = self.dial.checki.GetValue() + if 'vlabcolor' in self.parametres : + paramsimi['vlabcolor'] = self.parametres['vlabcolor'] + if 'check_bystar' in dir(self.dial) : + paramsimi['bystar'] = self.dial.check_bystar.GetValue() + paramsimi['stars'] = self.parametres['stars'] + self.parametres.update(paramsimi) + + def DoR(self, dlg): + if self.parametres['type_graph'] == 1 : + graph = False + wait = False + else : + graph = True + wait = True + pid = exec_rcode(self.parent.RPath, self.tmpfile, wait = wait, graph = graph) + if self.parametres['type_graph'] == 1 : + while pid.poll() == None : + dlg.Pulse(u'R ...') + sleep(0.2) + check_Rresult(self.parent, pid) def export(self, evt) : - pass - # def read_result(self) : - # #self.corpus.read_corpus_from_shelves(self.corpus.dictpathout['db']) - # #self.corpus.make_et_table() - # self.result = {} - # with open(os.path.join(self.pathout,'glob.txt'), 'r') as f : - # self.result['glob'] = f.read() + nb = 1 + while os.path.exists(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')): + nb +=1 + fileout = ffr(os.path.join(self.pathout.dirout,'graph_'+str(nb)+'.graphml')) + txt = """ + library(igraph) + load("%s") + source("%s") + fileout <- "%s" + graph <- graph.simi$graph + V(graph)$x <- graph.simi$layout[,1] + V(graph)$y <- graph.simi$layout[,2] + if (length(graph.simi$label.cex == 1)) { + V(graph)$weight <- graph.simi$mat.eff + } else { + V(graph)$weight <- graph.simi$label.cex + } + V(graph)$color <- vertex.label.color + V(graph)$frequences <- graph.simi$mat.eff + V(graph)$fprop <- graph.simi$mat.eff/nrow(dm) + V(graph)$label <- as.character(graph.simi$v.label) + E(graph)$weight <- graph.simi$we.width + write.graph(graph, fileout, format = 'graphml') + #saveAsGEXF(graph, filepath = fileout) + """ % (ffr(self.pathout['RData.RData']), ffr(self.parent.RscriptsPath['simi']), fileout) + filetmp = tempfile.mktemp() + with open(filetmp, 'w') as f : + f.write(txt) + exec_rcode(self.ira.RPath, filetmp) + mss = wx.MessageDialog(self.ira, fileout, _(u'File exported').decode('utf8'), wx.OK) + mss.CenterOnParent() + mss.ShowModal() + mss.Destroy() + + def blender(self, evt): + blender(self) + + +class GraphPanelSimi(wx.Panel): + def __init__(self,parent, dico, list_graph): + wx.Panel.__init__(self,parent) + self.afcnb = 1 + self.Dict = dico + self.dirout = os.path.dirname(self.Dict['ira']) + self.parent = self.GetParent()#parent + self.SetFont(wx.Font(10, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0, "courier")) + self.labels = [] + self.listimg = [] + self.tabsimi = self.parent.GetParent() + self.ira = self.tabsimi.GetParent() + self.panel_1 = wx.ScrolledWindow(self, -1, style=wx.TAB_TRAVERSAL) + afc_img = wx.Image(os.path.join(self.ira.images_path,'button_simi.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() + self.butafc = wx.BitmapButton(self, -1, afc_img) + export_img = wx.Image(os.path.join(self.ira.images_path,'button_export.jpg'), wx.BITMAP_TYPE_ANY).ConvertToBitmap() + self.butexport = wx.BitmapButton(self, -1, export_img) + blender_img = wx.Image(os.path.join(self.ira.images_path,'button_blender.png'), wx.BITMAP_TYPE_ANY) + blender_img.Rescale(32,32) + blender_img = blender_img.ConvertToBitmap() + self.butblender = wx.BitmapButton(self, -1, blender_img) + for i in range(0,len(list_graph)): + if os.path.exists(os.path.join(self.dirout,list_graph[i][0])) : + filename, ext = os.path.splitext(list_graph[i][0]) + if ext in ['.svg', '.html'] : + self.listimg.append(hl.HyperLinkCtrl(self.panel_1, -1, os.path.join(self.dirout,list_graph[i][0]), URL=os.path.join(self.dirout,list_graph[i][0]))) + else : + self.listimg.append(wx.StaticBitmap(self.panel_1, -1, wx.Bitmap(os.path.join(self.dirout,list_graph[i][0]), wx.BITMAP_TYPE_ANY))) + self.labels.append(wx.StaticText(self.panel_1, -1, list_graph[i][1])) + self.panel_1.Bind(wx.EVT_MOTION, self.onMouseMove) + self.__set_properties() + self.__do_layout() + + def __set_properties(self): + self.panel_1.EnableScrolling(True,True) + #self.panel_1.SetSize((1000,1000)) + self.panel_1.SetScrollRate(20, 20) + self.panel_1.SetFocus() + + def __do_layout(self): + self.sizer_1 = wx.BoxSizer(wx.HORIZONTAL) + self.sizer_2 = wx.BoxSizer(wx.VERTICAL) + self.sizer_3 = wx.BoxSizer(wx.VERTICAL) + self.sizer_2.Add(self.butafc, 0, 0, 0) + self.sizer_2.Add(self.butexport, 0, 0, 0) + self.sizer_2.Add(self.butblender, 0, 0, 0) + for i in range(0, len(self.listimg)): + self.sizer_3.Add(self.listimg[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.sizer_3.Add(self.labels[i], 0, wx.ALIGN_CENTER_HORIZONTAL, 0) + self.panel_1.SetSizer(self.sizer_3) + self.sizer_1.Add(self.sizer_2, 0, wx.EXPAND, 0) + self.sizer_1.Add(self.panel_1, 1, wx.EXPAND, 0) + self.SetSizer(self.sizer_1) + + def onMouseMove(self, event): + self.panel_1.SetFocus()