select.nb <- %i
do.select.chi <- %s
select.chi <- %i
+do.select.chi.classe <- %s
+ptbycluster <- %i
cex.txt <- %s
txt.min <- %i
txt.max <- %i
}
}
- if (over) {
- rn <- rownames(table.in)
- rownames(table.in) <- 1:nrow(table.in)
- table.in <- unique(table.in)
- rn.keep <- as.numeric(rownames(table.in))
- rownames(table.in) <- rn[rn.keep]
- tablechi <- tablechi[rn.keep,]
- if (qui==0) {
- cex.par <- cex.par[rn.keep]
- } else {
- cex.par <- NULL
- }
- }
+# if (over) {
+# rn <- rownames(table.in)
+# rownames(table.in) <- 1:nrow(table.in)
+# table.in <- unique(table.in)
+# rn.keep <- as.numeric(rownames(table.in))
+# rownames(table.in) <- rn[rn.keep]
+# tablechi <- tablechi[rn.keep,]
+# if (qui==0) {
+# cex.par <- cex.par[rn.keep]
+# } else {
+# cex.par <- NULL
+# }
+# }
if (do.select.nb) {
if (select.nb > nrow(table.in)) select.nb <- nrow(table.in)
row.keep <- select_point_nb(tablechi, select.nb)
row.keep <- select_point_chi(tablechi, select.chi)
table.in <- table.in[row.keep,]
tablechi <- tablechi[row.keep,]
+ } else if (do.select.chi.classe) {
+ row.keep <- select.chi.classe(tablechi, ptbycluster)
+ table.in <- table.in[row.keep,]
+ tablechi <- tablechi[row.keep,]
} else {
row.keep <- 1:nrow(table.in)
}
}
}
+
if (typegraph == 0) {
open_file_graph(fileout, width = width, height = height)
parcex <- taillecar/10
par(cex = parcex)
+ if (over) {
+ table.in <- table.in[order(cex.par, decreasing = TRUE),]
+ classes <- classes[order(cex.par, decreasing = TRUE)]
+ cex.par <- cex.par[order(cex.par, decreasing = TRUE)]
+ table.in <- stopoverlap(table.in, cex.par=cex.par)
+ classes <- classes[table.in[,4]]
+ cex.par <- cex.par[table.in[,4]]
+ }
make_afc_graph(table.in, classes, clnb, xlab, ylab, cex.txt = cex.par)
} else {
rnames
}
library(rgl)
- rn <- vire.nonascii(rownames(table.in))
+ #rn <- vire.nonascii(rownames(table.in))
+ rn <- rownames(table.in)
rgl.open()
+ par3d(cex=0.7)
#par3d(windowRect = c(100,100,600,600))
rgl.bg(col = c('white', "#99bb99"), front = "lines", box=FALSE, sphere = TRUE)
rgl.lines(c(rx), c(0, 0), c(0, 0), col = "#000000")
text3d(0,ry[2]+1,0, ylab)
text3d(0,0,rz[2]+1, zlab)
rain = rainbow(clnb)
- colors = rain[classes]
- text3d(table.in[,1], table.in[,2], table.in[,3], rn, col='black')
- if (tchi) {
+ if (tchi) {
maxchi <- norm.vec(maxchi, tchi.min/100, tchi.max/100)
} else if (!is.null(cex.par)) {
maxchi <- norm.vec(cex.par, txt.min/100, txt.max/100)
} else {
maxchi <- 0.1
}
+ colors = rain[classes]
+ text3d(table.in[,1], table.in[,2], table.in[,3], rn, col= colors , cex = cex.par)
for (i in 1:clnb) {
text3d(rx[2],(ry[2]+(0.2*i)),0,paste('classe',i),col=rain[i])
}
- rgl.spheres(table.in, col = colors, radius = maxchi, alpha = alpha)
+ #if (tchi) {
+ # rgl.spheres(table.in, col = colors, radius = maxchi, alpha = alpha)
+ #}
if (dofilm) {
require(tcltk)